Sol Genomics Network

Unigene SGN-U269122

Unigene Basic Information

Unigene ID:	SGN-U269122
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269122
mRNA sequence:	Length: 1885 bp

>SGN-U269122 Solanum tuberosum #4 (21 members)
GAGACCCTTGTACAGTTGAGGAGACTGTGTGAAGGATAAAGCTGTGGAGTCGTGGGTAAATTGGATCCCAAATAAGGAAAATTGATTAAG
TGAATGGGTCCGGCCCGGGCTGGTTAAAGAAGGTTAGCAGCTGGTTGATTGGTCCACAGCAGGGGTTCTGCTTGTGGGCTCTTCCATATG
GCTTACTCAAGTGCCCCAGAATTGTTGAAAGGCAGAACCTTCGGTCTATTTACAGCCAATTGTGTCAAGATGACATGCCTATGGTGCGAA
GGTCGGCTGCTACAAACTTGGGGAAGTTTGCTGCTACAGTTGAATCTGCTTACCTGAAGAGTGACATCATGTCAATATTTGATGATCTTA
CACATGATGATCAGGATTCTGTGCGATTATTAGCTGTTGAGGGCTGTGCTGCACTTGGCAAGCTGTTGGAGCCCCAGGACTGTGTGGCAC
ATATCCTGCCTGTCATTGTCAACTTCTCTCAGGACAAGTCTTGGCGCGTTCGATACATGGTTGCTAACCAGTTGTACGAACTATGTGAAG
CTGTAGGGCCTGAGCCCACTAGGACGGATTTGGTGCCTGCCTATGTCCGTTTGCTTCGAGATAATGAAGCTGAAGTTCGCATAGCTGCTG
CAGGAAAAGTCACCAAATTCTGCAGGATTCTTAGTCCCGAGCTTGCTATTCAGCATATTCTTCCCTGTGTGAAGGAATTATCATCAGACT
CGTCACAACATGTCAGATCTGCTTTGGCTTCCGTTATAATGGGGATGGCTCCTGTTTTGGGAAAGGATGCAACCTTTGAACATCTTCTTC
CAATATTTCTTTCCCTTCTGAAGGACGAGTTTCCCGATGTGCGCCTGAACATCATTAGCAAGCTTGATCAAGTCAATCAGGTGATTGGAA
TTGATTTATTGTCCCAATCTCTATTACCAGCTATTGTCGAGCTGGCAGAGGACAGGCATTGGCGAGTCCGTCTTGCAATAATAGAATACA
TACCTCTATTGGCAAGTCAATTGGGCATAGGATTTTTTGATGATAAGCTGGGTGCTCTTTGCATGCAATGGTTACAGGACAAGGTTTATT
CAATTAGAGATGCTGCTGCTAATAACTTGAAACGTCTTGCAGAAGAATTTGGTCCAGAGTGGGCAATGCAGCATATAATTCCTCAGGTCT
TGGATATGACTACCAGTCCACATTATTTGTATCGAATGACTATTCTTAGATCAATTTCATTACTTGCACCAGTAATGGGCTCTGAGATAA
CTTGTTCTAAGTTGCTGCCTGTGGTTGTTACTGCTACTAAGGATAGAGTGCCCAACATTAAATTTAATGTGGCAAAGGTTTTGCAATCCC
TTATACCTATTGTTGACAACTCGGTGGTGGAGAAAACCATTCGGCCCAGTTTAGTAGAGCTAGCTGAAGACCCTGATGTCGATGTTCGCT
TTTATGCCAATCAAGCACTCCAGTCGATCGATAACGTCATGATGTCAGGTTAGAGAAAGCTAAACATTGTCAGGTGAGAGTAGTACAAAT
CTCTCTTCTAATCCCTCTTCGGTAGTCTTGGATTATGCTCTCACACGAAGAAGCAAAAGGGGAAAAAGGTGTACAATGTAAAATGCATCG
TGTTGAGCTTGGAGTCGTATATTGTTGTCACTAATTCTTTTGTAGGATTCGGCATTCAAGATGCTGTGACACTAATGAAAACCTGAGTGT
TTTTTCATGTAAAGCTGCTGCCATACTTTACTATTTGGATCTGCTAAGCTCAATTTGTATTTGTTTTTGTTAGTGTACTTTTTGAGGTTT
GAAATTACAACATTTTAGCTGTGTTACTCTAAGCAAACAAATTTGTCGTTATATTAGTGTTTGCATTTCTTAGCCTAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	STM	mixed tissues	14805	8
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	3
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	718	PBS_lyase_HEAT HEAT	26
2	22692	PBS_lyase_HEAT HEAT	21
5	56889	PBS_lyase_HEAT HEAT	20
1.1	101812	Armadillo-like helical - Molecular Function: binding (GO:0005488) HEAT	35
2	119295	Armadillo-like helical - Molecular Function: binding (GO:0005488) HEAT	17
5	129704	Armadillo-like helical - Molecular Function: binding (GO:0005488) HEAT	16

Preceding Unigenes (1)

Unigene	Build
SGN-U243829	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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