Sol Genomics Network

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Unigene SGN-U270079

Unigene Basic Information

Unigene ID:	SGN-U270079
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270079
mRNA sequence:	Length: 1478 bp

>SGN-U270079 Solanum tuberosum #4 (21 members)
CATAACTATTCATATCTTCTAATTTTATATTATAAAAAATAATATCAAGATATATTTTTTCTATATAATAAGGCCACATAACTATTTCCC
AATTTGTCCACAAGGTTTTCAAGAACTTTTGTGTTTGAGAAAGTTTGAATCTTGTTGTCTCTTGAATCAAGAAAATGTTGCTAAGGAGTT
CTTCAACACCACTTCTTGGATCTTTACACTCAGAGAGCCCCAACAGTCATCACCATCATCATCAGTCTGATTTAACCCCAAATCACACAC
CCAATTCCATTCACCATAGTTATAGCAAACTCTCATGTAGCCATGGTGGATATCAGAATTTCAATAGAAGTTTATACCCTTCTAACTCTC
CAATCTCTCCTTCATTTTCTGAGATCAGCAATGGCAACAAATTCCCATCTCATGGTTTTAGAAGAGCTCAATCTGAAGGGAACTTGGAAG
GATTAGTAAAAGTTTCAACTGATGAAGTAGTTGATGAATTTACCCTCTCTAAACCAACCAAGACACTTTCATGTAAACCCCCAAAATCAT
TCTTGGAAACTATTCCATCTTTCTCCATTCACAATTCAAGGGAGCTTCATTCGGACGACGATGACAGTGATGAGGGAGATGACTTTGATT
GCATCAGTGGACAGTACAGTTTGGGAATGAATGCTGTAAAAGGGGAAATGAGTTATGTGAGTCGAAATTCGAAGATAGAAATAGTTGAAG
GCAGAGAAGAGATGTTCCTAGCAAGAGGACTTGGGGTTGCTGATATTGGTTGCTTTGATGATGGTGGCTGTGGCATAGGAGGTGGAGGAG
GCGGTGTTTATCGCCCAGTAGCGTTCGATAAGGATGGTGGTGACAGCCAGGGACTACATATAGAAGAGCACTACAAAAACATGATAGAAG
AGAATCCTGGCAATTCCTTATTCTTGAGGAATTATGCCAACTTTTTATACAAAACAAAGAAAGATCTTAAAGGGGCAGAGGAATACTACT
CAAGAGCTATTTTAGCAGATCCAAGTGATGGTGAAGTTCTTTCACAATATGCTAAGCTTATATGGGAGCTTCACCGTGATACAGATAGAG
CCACGAGCTATTTCGAAAGAGCAGTCCAAGCAGCCTCTACTGACAGTCACATACATGCTGCTTATGCTAATTTCCTCTGGGAGATAGAAG
ATGAGGGAAGATGAAACGCAAACGCAACCAATGGTGCATACTGTAGCCACGGCTTCTATAACTGTTTGACTTGAAAGTACATTATCTTTT
GTTGAAATATTTGCAGCAGAGTTAGTAGAAGCTTAGCAAGCAATTAGGAAGAACCTGTAATTTAGCATATAGTTAGTAATAAAACTGATG
CACAGGACTTCTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	STM	mixed tissues	14805	7
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	285	TPR	55
2	22330	TPR	34
5	60497		5
1.1	101685	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488)	46
2	118741	Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488)	32
5	133043		5

Preceding Unigenes (3)

Unigene	Build
SGN-U245928	Solanum tuberosum #3
SGN-U248429	Solanum tuberosum #3
SGN-U260498	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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