Sol Genomics Network

Unigene SGN-U270137

Unigene Basic Information

Unigene ID:	SGN-U270137
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270137
mRNA sequence:	Length: 1408 bp

>SGN-U270137 Solanum tuberosum #4 (23 members)
CTCTTCACCAGTTAAACCCTATACCCTCTCTCCTACAAAAAGTCACTCCAAAGTTCATCAGCAAGAATGCGTGAGATTTTGCACATTCAA
GGAGGTCAATGTGGAAACCAAATCGGAGCTAAGTTCTGGGAAGTTATCTGTGCCGAGCACGGCATTGATTCCAGCGGAAGGTATCAAGGA
GACAGTGATCTTCAATTGGAGCGACTGAACGTGTACTACAATGAAGCAAGCTGTGGAAGGTTTGTTCCACGCGCCGTCCTCATGGATTTG
GAGCCGGGAACTATGGATAGTGTCAGATCTGGACCTTATGGTCAGATTTTCAGGCCTGATAACTTCGTTTTTGGCCAGTCAGGTGCTGGT
AACAACTGGGCGAAGGGACATTATACTGAGGGAGCGGAGCTTATCGACTCGGTGCTTGATGTTGTGAGGAAGGAGGCTGAGAATTGTGAC
TGTTTACAAGGTTTCCAGGTTGCTCACTCTTTAGGAGGTGGAACTGGATCAGGAATGGGAACACTCCTTATATCTAAGATCAGGGAGGAG
TACCCAGATAGAATGATGCTTACTTTCTCTGTGTTCCCTTCCCCCAAAGTTTCAGACACAGTTGTTGAGCCCTATAATGCTACTCTTTCT
GTTCACCAGCTTGTTGAGAATGCAGATGAGTGTATGGTGTTGGATAATGAAGCTCTTTATGACATTTGCTTCCGAACTCTCAAACTTACT
ACTCCGAGCTTTGGGGACCTAAACCATTTGATTTCTGCCACCATGAGTGGTGTAACTTGCTGTCTCCGTTTCCCTGGTCAACTCAACTCT
GATCTCCGCAAGCTTGCTGTTAACCTCATCCCATTCCCTCGGTTGCATTTCTTCATGGTTGGATTCGCTCCGCTCACTTCTCGTGGGTCG
CAGCAATATCGAGCATTGACTGTTCCTGAGCTAACACAGCAGATGTGGGATGCAAAGAATATGATGTGTGCTGCTGATCCTCGTCATGGT
CGATATTTGACTGCTTCAGCTATGTTCCGTGGAAAGATGAGCACCAAGGAAGTCGATGAACAGATGATTAATGTGCAGAACAAGAACTCT
TCCTATTTTGTTGAGTGGATCCCTAACAATGTAAAGTCAACAGTCTGTGACATCCCTCCTACTGGTCTGAAGATGGCCTCAACTTTCATT
GGTAACTCCACCTCTATTCAGGAGATGTTCCGTAGGGTCAGTGAGCAGTTTACAGCTATGTTCCGAAGAAAGGCTTTCTTGCATTGGTAC
ACTGGAGAAGGTATGGATGAGATGGAGTTTACTGAGGCTGAAAGCAACATGAACGATTTAGTTTCTGAGTACCAGCAATATCAAGATGCA
ACAGCTGAAGAGGAAGGTTATGACTATGAAGATGAGGAGGATGAACCACTAGAATCTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	4
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STOL	Stolon	6462	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	5
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (23)

Alignment image suppressed for unigene with 23 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 7 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	68	Tubulin_FtsZ Tubulin Tub_FtsZ_C	172
2	22017	Tubulin_FtsZ Tubulin Tub_FtsZ_C	143
5	56318	Tubulin_FtsZ Tubulin Tub_FtsZ_C	83
1.1	101452	Tubulin - Molecular Function: structural molecule activity (GO:0005198) - Cellular Component: microtubule (GO:0005874) - Biological Process: microtubule-based movement (GO:0007018) Tubulin/FtsZ GTPase Tubulin/FtsZ C-terminal - Molecular Function: GTPase activity (GO:0003924) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: protein complex (GO:0043234) - Biological Process: protein polymerization (GO:0051258)	140
2	118444	Tubulin/FtsZ GTPase Tubulin - Molecular Function: structural molecule activity (GO:0005198) - Cellular Component: microtubule (GO:0005874) - Biological Process: microtubule-based movement (GO:0007018) Tubulin/FtsZ C-terminal - Molecular Function: GTPase activity (GO:0003924) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: protein complex (GO:0043234) - Biological Process: protein polymerization (GO:0051258)	138
5	128984	Tubulin/FtsZ GTPase Tubulin - Molecular Function: structural molecule activity (GO:0005198) - Cellular Component: microtubule (GO:0005874) - Biological Process: microtubule-based movement (GO:0007018) Tubulin/FtsZ C-terminal - Molecular Function: GTPase activity (GO:0003924) - Molecular Function: GTP binding (GO:0005525) - Cellular Component: protein complex (GO:0043234) - Biological Process: protein polymerization (GO:0051258)	81

Preceding Unigenes (1)

Unigene	Build
SGN-U245079	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: