Sol Genomics Network

Unigene SGN-U270445

Unigene Basic Information

Unigene ID:	SGN-U270445
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270445
mRNA sequence:	Length: 1763 bp

>SGN-U270445 Solanum tuberosum #4 (20 members)
TGTTTTTCTGTTAACAAAAAATGGAAGGAAAAACCATTTCCCTTTCCTTCCTTTTCCTTTCTCTCTTTGCCATTTATGTCTCTTCCACTT
CCCTTCAATACCAAACATTACTCTTACATTCCCTCCCACTAGCTCAACTTCAATCCCTAGATTTCGATGCTCAACTACTTTCCGGCGATG
GCTCCGACCTGGATCCGGATAACACTCTCTCTCTACAGTTGCATCATGTAGACTCAGTATCTCCTTCATCCTTCAATGCTACACCACATG
CTCTGTTTAAGCTCCGTCTTCAACGCGATGCCTATAGAGCTAAGGCAATTTCTGACCTCGCCGCTGCTAACGCCACCGTTGGCCGCCGCG
CCGGAAAGCCCCATGCTGGTGGTAGGGATTTCTCTAGTTCTGTTGTTTCTGGACTGTCTCAGGGGAGTGGAGAGTACTTCACGCGAATCG
GTGTTGGTACTCCGCCTAAGTATGTTTATATGGTGTTGGATACGGGAAGTGACGTCGTTTGGATCCAGTGTTCGCCTTGTAAGAAATGCT
ACACTCAATCCGACCCGGTTTTTGACCCGAGCAAATCGTCTTCCTTCCTTGGTGTTGCATGTGGGTCGCCTTTGTGTCGCCGGTTGGATT
CTGCTAGCTGTAACCGTAAAAAGTGTCTTTATCAGGTTTCTTACGGAGACGGTTCTTTCACCGTCGGTGATTTTTCAACTGAAACGTTAA
CTTTCAGGGGGACACGTGTCAACAACATGGCCCTTGGATGCGGCCACGATAACGAAGGTTTATTCGTTGGAGCCGCCGGTTTACTAGGTC
TCGGCCGGGGAAGACTGTCATTCCCGACTCAAGCTGGTCGGAGATTCGGCCGGAAATTCTCCTACTGCCTTGTCGACCGGTCCGCTTCCT
CTAGACCATCCTATCTAGTCTTCGGCGAATCAGCGGTTTCTAGAACCGCCGTGTTTACCCCACTGGTCAATAACCCAAAACTAGACACGT
TTTACTACGTGGAGCTCACCGGAATCAGCGTCGGCGGCGCTAGGGTTCCTGCCATCAGACCGTCGCTTTTCAAGCTAGACGCCGCCGGTG
ATGGTGGTGTCATAGTAGATTCAGGAACTTCAGTGACTCGATTGACCCGACCCGCTTACGTAGCACTAAGGGACGCTTTCAGAATGGGTG
CTAGAGATCTGAAGAGAGCACCAGATTTCTCATTGTTCGATACGTGCTTCGATCTGTCAGGGAAAACGGAAGTGAAGGTGCCGACTGTGG
TTATGCATTTCCGTGGAGCTGACGTGTCATTGCCGGCGTCGAATTACTTGATTCCGGTGGACAGTGATGGGACATTCTGCTTTGCATTTG
CAGGTACAATGAGTGGATTGTCGATTATCGGAAACATTCAACAGCAAGGTTTCAGGGTAGTGTTTGATCTTGCTGGTTCTCGTTTAGGCT
TTGCTCCTCGTGGCTGTGCTTAAATTTACTACACATCAAAAAATTGCTTCCAAATTCCCCAGTTTATTATGTTTGATGATTTCTTTGGAT
TAGGAGAAGATGATTAGTTGTTTGTGTGTTTGTATTATGTGCTAAATTAATGTTGTAATACAGGGTAAGAGAAGAAGCAAATTACAAGTA
TGTAGTGAGAATTAGTGTAGATTTGTGAGTAGTAATTTGTAACTCAAAACACTCTGCTTTCTGTAAGTTGATAGTAGCTGCAAAATGTGC
GGCGCTGCTTAAACTTATATATTTTTAATTTGTTTTCTTTAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TUBS	Tubers	5976	3
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	3
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	4
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	3

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	43	Peptidase_A1	249
2	22006	Peptidase_A1	156
5	56361	Peptidase_A1	60
1.1	101417	Peptidase aspartic catalytic	227
2	118448	Peptidase aspartic catalytic Peptidase A1 pepsin - Molecular Function: pepsin A activity (GO:0004194) - Biological Process: proteolysis (GO:0006508)	130
5	129036	Peptidase aspartic catalytic Peptidase A1 pepsin - Molecular Function: pepsin A activity (GO:0004194) - Biological Process: proteolysis (GO:0006508)	54

Preceding Unigenes (1)

Unigene	Build
SGN-U245095	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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