Sol Genomics Network

Unigene SGN-U272071

Unigene Basic Information

Unigene ID:	SGN-U272071
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272071
mRNA sequence:	Length: 2374 bp

>SGN-U272071 Solanum tuberosum #4 (11 members)
TTTCTCCGTCTCTCCACTTGGCGGAAGAAACTAATGTTTATTTAGCAAAGGCGAAACACCCTTTCGGAGATCTCAAGAGACTAATCCCAA
CTCCTTTTACGCCATAACCCCCCATTCATATTTCATTCCCCTCACTTCTATCGAACCCATCTTCTCTGATTTATCAAGATATGGTAACCC
TTTATTCTTCCCCTTCCACTAACTGTTCTGGGGCTTTTTCATCTTACTCCAATTCTTCTATTGGCTTCTACAATTATCACAACAACTTCC
CTATTTCATCCAGAAAGTTTGGTTCTCACAAGATTTCTTTGCAAATTAATGCCATTCGCATGCAAGATGGTGCTGTAGTGGCTCAACCTA
GCAAAACCCAAGATGAAACTCCTTTGAAGAAATTAAAAGATGGAATTTTGTCAAAGGAGCAGAAACATACATTTGATTTTGATTGCAACA
AAGATAAATCAACTGTCAGTATTACTGTTGTTGGTGCTTCAGGAGATCTTGCCAAAAAAAAGATATTTCCTGCACTTTTTGCACTTTATT
ATGAGGGTTGCTTACCGGAGCATTTCACTATTTTTGGCTATGCCCGGAGTAAGATGACTGATGATGAACTCAGGAACATGGTCAGCAAGA
CACTTACTTGCAGGATTGATAAGAGGGAAAATTGTGGTGAAAAGATGGAACAGTTTCTAGAAAGGTGTTTCTACCATAGTGGACAATATG
ATTCCCAGGAACACTTTGCAGAGCTTGATAAAAAGCTGAAAGAACATGAGGCTGGAAGGTTTTCCAATCGTCTGTTTTACTTGTCCATTC
CACCAAATATTTTTATAAATGCTGTACGATGTGCAAGCCTCTCTGCGTCATCTGCTCATGGATGGACTAGAGTCATTGTAGAGAAACCCT
TTGGTCGGGATTCTGAATCCTCTGCTGCATTAACAGGAGCACTTAAGCAGTACTTGAAGGAAGATCAAATTTTCAGGATTGATCACTATT
TAGGGAAGGAGCTTGTGGAAAACCTTTCTGTCCTTCGTTTCTCCAACTTGATATTTGAACCCTTATGGTCAAGGCAGTATATAAGGAACG
TGCAATTTATTTTCTCTGAAGATTTTGGCACTGAAGGAAGGGGAGGTTATTTTGATCATTATGGGATAATTAGAGACATTATGCAAAACC
ATTTGCTTCAAATTCTTGCCCTCTTTGCCATGGAAACACCTGTCAGTTTGGATGCAGAAGATATCAGGAATGAAAAGGTAAAAGTTCTGC
GTTCTATGAGACCTTTACAACTAGATGATGTTATCGTCGGGCAGTACAAAAGTCACACAAAAGGGGGTGTTAACTATCCTGGTTATACCG
ACGACAAGACTGTACCCAAGGACAGTCTAACCCCAACTTTTGCTGCAGCTGCTCTTTTCATAGATAATGCAAGATGGGATGGGGTGCCTT
TCCTTATGAAGGCTGGAAAAGCTTTACATACCAGGAGTGCGGAAATAAGAGTACAATTCAGGCACGTGCCGGGAAATTTATACAATAAGA
ACTTTGGCTCAGATCTAGATCAGGCAACAAACGAGCTTGTTATCCGTGTTCAACCTGATGAAGCTATATACCTAAAGATCAATAACAAAG
TTCCCGGTCTAGGAATGAGACTGGATCGCAGTAATCTTAATCTGCTTTACTCAGCAAGATACGCGAAGGAGATCCCTGATGCATATGAGC
GGCTACTTCTTGATGCCATAGAAGGTGAACGTAGGCTTTTTATTCGCAGTGATGAACTGGATGCTGCTTGGTCTCTTTTCACACCAGTGT
TGAAAGAACTTGAGCATAAGAAAATAGTACCGGAAAGCTACCCCTATGGAAGTCGAGGACCTATTGGAGCACATTACCTTGCAGCACGAT
ATAAAGTAAGATGGGGTGATCTTGCTTAGACAAAGTAATTTGCCATTGCTATGAGAAACCATATGTAGCCTTACAACTTCTTCTGCTTAG
TATGTTGCAACCAAATTTGTTAGTGGGATTCCAGTATCCAGACTAACAAAGCTTGAAGTTGCTTACTGTCAAGGCATATGACAATAGAGA
ACACACAGTTGGTAAAACAAAAGAAGAGGAGAATCTGGGTTCATTTTGTTATTTCAAATAAATCTTTTCTATTGCACCAACGCATGTCCA
TTGGTAGCATCTTTTTTCATGTAGCATTTAGTATACCTTGTTAGAATCTAATAATTCGAAAAGTCATCGTCTTCTTATCAAGTATTCATA
CATGCAGCTTTCTGGTTCCGAACTATATTAAATTTTATTGCATGAAATGTACTATGAAATAGAAGGTTTGTTGCCTTCAATATTTCTTCA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
g6p1dh	glucose-6-phosphate 1-dehydrogenase	glucose-6-phosphate 1-dehydrogenase

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	vSTmRNA		708	2

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	746	G6PD	25
2	22547	G6PD	25
5	56696	G6PD	25
1.1	102184	Glucose-6-phosphate dehydrogenase - Molecular Function: glucose-6-phosphate 1-dehydrogenase activity (GO:0004345) - Biological Process: glucose metabolism (GO:0006006)	19
2	119154	Glucose-6-phosphate dehydrogenase - Molecular Function: glucose-6-phosphate 1-dehydrogenase activity (GO:0004345) - Biological Process: glucose metabolism (GO:0006006)	19
5	129567	Glucose-6-phosphate dehydrogenase - Molecular Function: glucose-6-phosphate 1-dehydrogenase activity (GO:0004345) - Biological Process: glucose metabolism (GO:0006006)	18

Preceding Unigenes (2)

Unigene	Build
SGN-U247177	Solanum tuberosum #3
SGN-U255676	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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