Sol Genomics Network

Unigene SGN-U272408

Unigene Basic Information

Unigene ID:	SGN-U272408
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272408
mRNA sequence:	Length: 709 bp

>SGN-U272408 Solanum tuberosum #4 (11 members)
TGCTCTCCGCCACTTCTCTATTTGCATTCTTTCAGATCTAGTCCTCTCTCTTTCTTTCTTTTGCATCCATCAATGGCTTCTATTACAGGC
TCATCAGCTACCGCCATGTCCTGCTCCTTCAAGGAACTTGACCGTGTCTCGAATTTGAAGACATCTTCTCTTTCATTCAAGGGGATTAGC
TACTCTTCCATCAGAGTGAATCCAGCCACTCGTCGCCTCAGTATTACTTGTGCGGCTAAGCCAGAGACTGTCAACAAAGTGTGTGACATT
GTGAAGAAACAACTGGCTCTCTCTGCTGGTACTGAAGTCTGTGGAGAATCAAAGTTTGCTGCGCTTGGTGCTGATTCTCTTGATACGGTG
GAGATTGTCATGGGACTTGAGGAAGAGTTTGGCATCTCCGTGGAAGAAGACAGTGCTAACAGTATTGCAACAGTTCAAGATGCTGCAGAC
CTGATTGAGGATCTCATTTCAAAGAAAGCTTGAGACTGCACTAAACTTTAGAACCTCAGCTAGTTTGCTTATTAGGGTTATCTCGTTTGG
TTGTGTTTTACAGTTGAAGATGATGCAGTTTGCAATATTGAACTTTGTCTAATTAAAGAACTCTGTTTCATCAGAGAGGAAGCCTCGTGA
GCTGTCTTGTTTTCGCCGAATCCTGCAATTAAATCTAAAGATATACATGTATATCTATTTTGGCTAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	398	Acyl_carrier Pp_bind	43
2	22564	Acyl_carrier Pp_bind Ppantne_S	25
5	56746	Acyl_carrier Pp_bind Ppantne_S	24
1.1	101737	Phosphopantetheine-binding - Molecular Function: cofactor binding (GO:0048037) Acyl carrier protein-like Acyl carrier protein (ACP) - Molecular Function: acyl carrier activity (GO:0000036) - Biological Process: fatty acid biosynthesis (GO:0006633)	42
2	118997	Phosphopantetheine-binding - Molecular Function: cofactor binding (GO:0048037) Acyl carrier protein-like Phosphopantetheine attachment site - Molecular Function: phosphopantetheine binding (GO:0031177) Acyl carrier protein (ACP) - Molecular Function: acyl carrier activity (GO:0000036) - Biological Process: fatty acid biosynthesis (GO:0006633)	23
5	129405	Phosphopantetheine-binding - Molecular Function: cofactor binding (GO:0048037) Acyl carrier protein-like Phosphopantetheine attachment site - Molecular Function: phosphopantetheine binding (GO:0031177) Acyl carrier protein (ACP) - Molecular Function: acyl carrier activity (GO:0000036) - Biological Process: fatty acid biosynthesis (GO:0006633)	22

Preceding Unigenes (1)

Unigene	Build
SGN-U247331	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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