Sol Genomics Network

Unigene SGN-U275228

Unigene Basic Information

Unigene ID:	SGN-U275228
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	275228
mRNA sequence:	Length: 1415 bp

>SGN-U275228 Solanum tuberosum #4 (6 members)
AAATCCCAATTCAAGAACCCTACACTTCCCCCAAAACCCTCATAGACCCAGAAAGAGCACTTCACAGATCAATCGGACGCTGAATCAAGA
TGTATTACAGAGGAAACTACATGGACAGTGGCGATGCCCGTGAAATGGGCTTCAAAAGGCAACGCATAATGGATCAAGGTTCCTCTTATT
ATGCTACTCCTCCAGGGTCAAGCTATATGTACAATCCTCCTCCTCCTCCACCTCCCCCGTCATACTCTTACCATGGACAGCCTCCACCAT
TCCCTGTTGTTCGACTCCGTGGCCTCCCGTTTGATTGCTCAGAGACTGAGATTGCTGATTTCTTGCATGGTTTGGATGTAGTTGATGTGC
TTCTTGTCCACAAAGGTGGAAGATTTACAGGGGAAGCATACTGTGTTTTGGGGTACCCTCTTCAAGTTGATTTTGCTCTTCAGAGAAACA
GGCAGAATATTGGACGAAGATATGTTGAGGTTTTTAGAAGCAAGAAGGAGGAATACTATAAGGCTATAGCCAATGAAGTTTATGATTCTC
GTGGTGGTTCAGTTCCGAGGGCTAGATCTGCTGATGAAAGCAAAGACCTTGCAGAACACACTGGCGTACTATGGCTGAGGGGGCTGCCAT
TCTCAGCTAGCAAGGAAGATATTATTGATTTCTTTAAAGATTTTGAACTTCCAGAAAAATCAATCCATATAACAGCTACTTTTGAGGGTA
GACCTACAGGGGAAGCATTTGTTGAATTTGCTAGTGCAGATGATTCAAGAGCTGCAATGGCCAAGGATAGGATGACAATAGGGAATCGCT
ACATAGAGCTTTTCGCTTCATCGTCTGAGGAGTTGGAGGAAGCAGTTTCAAGGGGCAGAGTACTGGAGAAACCAGTGGATGGGAGAGACC
CGAATGAAGTCACGTCTATTTTGCGGATGAGGGGTTTGCCATTTTCTGCTGGCAAGGATGACATCATGGATTTCTTCAAAGATTTTGCGT
TGACTGAGGATGCAATTCATGTCACATTTCTTTCTGATGGAAGGCCAACTGGAGAAGCTTTTGTAGAGTTTGCAAGCACCGACGATGCAA
AAGCAGCCCTGGCAAAGGATAGGATGACACTTGGAAGTCGTTACGTTGAGCTTTTCCCATCTTCAATCGAGGATATGAATCACGCCATAT
CAAGGGGGCGGTAATGAACTTTATTTTTCCTTAGTTAATAATCGTAATGTTGTAACTTGGGGATTTGGTGCTAGTTTTCTGCGAGGACGA
CTCTTTATTTTTCACTACAGGAGATAGAAAGAACTTTAGGGAACTTCTGCAGTCATCATCTGTTTGCTCTTAGTTTCATGAGTTTATGGT
GTTACTATTTATGTGAAAAGTACTCATTAAACCTTAAACAAGAATATGTTGCTGCTTGATACACT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1718	RNA_rec_mot	11
2	23721	RNA_rec_mot	11
5	62234		3
1.1	101496	Pyridoxal-dependent decarboxylase - Molecular Function: carboxy-lyase activity (GO:0016831) - Biological Process: carboxylic acid metabolism (GO:0019752)	100
2	119849	Nucleotide-binding alpha-beta plait - Molecular Function: nucleotide binding (GO:0000166) RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	12
5	133676	Nucleotide-binding alpha-beta plait - Molecular Function: nucleotide binding (GO:0000166) RNA-binding region RNP-1 (RNA recognition motif) - Molecular Function: nucleic acid binding (GO:0003676)	4

Preceding Unigenes (1)

Unigene	Build
SGN-U254454	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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