Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U574181 in the current build, Tomato 200607 #2

Unigene SGN-U313631

Unigene Basic Information

Unigene ID:	SGN-U313631
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313631
mRNA sequence:	Length: 1480 bp

>SGN-U313631 Tomato 200607 #1 (74 members)
ATATGGACATCAAGAAAATCATCATAGCCCTTCTTCTTCTTCTTTATTCTCTGCCCCAAGTTCTTCTTCACACTGAGGAAGGAAAAAAAG
GCACCAAATCAACAACAACATGGCTAGTTTGGTTGCTATTCAACCCAAACAGCCTTCTTTCTCTCTCCTTCCTTCTTCCAATTCTGACTT
CAATGGTGCCAGATTGATCTCCTCATTTCAGTATAAGAGGAAACCATGCTTGTCAAAAGGAGCATTGCAAGTTACAGCCTCGAGTGAAAA
GAAAATCCTGATAATGGGAGGCACGCGATTCATTGGTGTGTTCCTATCGAGACTTCTTGTGAAAGAAGGCCACCAGGTTACTCTATTCAC
AAGAGGAAAAGCTCCAATCTCTCAACAATTGCCAGGTGAATCGGACCAGGATTATGCTGATTTCTCCTCCAAGTTATTGCACTTGAAGGG
TGACAGAATGGATTTCGATTTTGTGAAGAGCAGTCTTTCTGCAGAGGGCTATGATGTTGTGTATGACATAAATGGACGTGAAGCAACTGA
AGTGGAGCCAATATTGGATGCATTACCTAATCTAGAACAGTACATCTACTGCTCTTCAGCTGGTGTATACCTTAAAACTGATTATTTACC
ACATTTTGAGGTTGATGCAGGTGACCCGAAGAGTAGGCATAAAGGAAAGCTTGAGACAGAAAGCTTGTTAGTATCACGAGATGTTAATTG
GACTTCTCTAAGGCCTGTTTATATTTATGGGCCACTTAACTACAATCCTGTTGAAGAGTGGTTCTTCCACCGATTGAAGGCTGGTCGCCC
AATTCCGATTCCTAACTCAGGGATGCAAATAACTCAACTTGGACATGTGAAGGATCTTGCAAAGGCTTTTGTTCAGGTTCTTGGAAATGA
GAAAGCAAGCAAGCAAGTATTTAACATATCCGGAGAGAAATATGTCACATTTGATGGATTAGCTAAGGCTTGCGCCAAGGCTGGTGGTTT
CCCGGAACCCGAGCTTGTTCATTACAACCCTAAGGAGTTCGATTTTGGCAAGAAGAAAGCATTCCCATTCCGTGACCAGCATTTCTTTAC
ATCCATCGAGAAGTCAAAGGCTGAGCTAGGATGGAAACCTGATTTTGATCTGGTGGAAGGTCTTACAGACTCTTACAACCTAGATTTCGG
ACGAGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGATATGATTCTTGAAAAGAAACTAGTTCCCCAGAGCTAATATTTCTGTTT
TTCATTTCATTAGTTTTGGTTTCTTGCTTTTTCTCCAAGAAGTTCACAAGTCATTAGTGGCAAACTATTTGAAATTTTCCTTGTATATTA
ACTTCACTAAAATGAAATGAATGACAACTATTGTCATTTTGCCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCCGGGGGGGG
GGCCCGGACCCCCTTTCCCCCTAAAGGGGGGCAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (22)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPP	pollen pollen collected from open flowers	5426	1
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	4
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	2
Solanum lycopersicum	LB	Leaf Mature leaves	3316	2
Solanum lycopersicum	LC	Leaf Mature leaves	5712	11
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	7
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	16
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	7
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (74)

Alignment image suppressed for unigene with 74 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (2)

Annotations (manual: 2 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102472	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	13
2	122042	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	5
5	132255	NAD-dependent epimerase/dehydratase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: nucleotide-sugar metabolism (GO:0009225) - Molecular Function: NAD binding (GO:0051287)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U213740	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: