Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U564880 in the current build, Tomato 200607 #2

Unigene SGN-U316469

Unigene Basic Information

Unigene ID:	SGN-U316469
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	316469
mRNA sequence:	Length: 1207 bp

>SGN-U316469 Tomato 200607 #1 (17 members)
ATCATGTATTTTGTAGTATTCAAATTCCAGTGCACTAGCAAATGTAGTGGGCACACCACATCTGTATACTCTCTCTCTATAACGGAAGAG
CATATAACACGAGAGATTGTAAGTGCAAGTGAGAGAAATAGGAAGAAAGATTTGAGCTAGAAAAGTTTTGAAGGTTGAAAATCATGGCGT
CTGTAATTGGAGTTCATAACTTTGCTGCTTTGAAGGCTGTTTATGAAAGACCGTCGTTGCGGTGGATTCTGCAACCCAAAATGCAGCTGC
CATTTTCAGGTCGGAGAATGAATCTGCAATCTAAGACTTCTGATGAGGTTGAAGGTTCACCATTTGATCATAAAGGGTTATTACAGAGTC
GAGAATTATATCAGTATATTTTGGAGACTAGTGTTTACCCAGGAGAACCTGCGCCTCTTAAAGAGATCAGGGCTATAACAGAAAATCATC
CTTATTTTTTTATGGGTGCATCACCTGATTCAGGTCAACTGATAGCCATGCTGTTGGATATGTTAAATGCCAAAAACACAATTGAACTCG
GAGTCTTCACCGGTTATTCTCTGCTTCTCACTGCTTTTACAATTCCTGATGATGGCAAGATCCTAGCAATTGACCCGGATCTCAAGTCTT
ATGAAATGGGCCTGCCAATCATTCAAAAAGCCGGTGTTGAGCATAAGATCAATTTCAAACACTCCCCGGCTTTACCTGTTCTTGACAAAC
TCCTGGAAGATGATGATAACAAAAGTAGGTTTGATTTTGCATTTGTGGACGCGGATAAGACTAACTACGGAAACTATCACGAGAGACTAA
TGCAGCTGGTGAAAGTTGGAGGCTTGATAGTGTATGATAACACACTATGGTATGGAACACTTGTGATGCCAGAGGAGAGCGTTCACGAGT
TGATGAGATCAGAAAGAAGTTACTTACTGGAGTTAAACAAATCCCTTGCTGCAGATACCCGAATTCAAATTTCTCAAGTTCCATTAGGTG
ATGGAATGACCATCTGCAGGCGACTCTTTTGAATAACAAAATTAGGTACAACTCGTACTCAAAGTTTCACTTGCAGATGACCATCACTTC
AATACCATGTTAGCTATTGATTAGAAGTCATGTCGCTTGTCAGTAGTTTCATCAAATAATGTTTGATTAATCATCAAAATAAATGAATTT
TTCTGGGATGGTTTAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1

mRNA member sequences (17)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101787	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) O-methyltransferase family 3 - Molecular Function: O-methyltransferase activity (GO:0008171)	37
2	118672	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) O-methyltransferase family 3 - Molecular Function: O-methyltransferase activity (GO:0008171)	37
5	129169	SAM (and some other nucleotide) binding motif - Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757) O-methyltransferase family 3 - Molecular Function: O-methyltransferase activity (GO:0008171)	34

Preceding Unigenes (1)

Unigene	Build
SGN-U215109	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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