Sol Genomics Network

Unigene SGN-U578295

Unigene Basic Information

Unigene ID:	SGN-U578295
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1278 bp

>SGN-U578295 Tomato 200607 #2 (99 members)
GGGGAACCAGAGAAGCAAAAAGGGAGAGAATAGAGCAAAATCTCTCTCTGTTTTCACTACAAAAAATCTTTGATTTCAATTTGAGAGAGA
TCGGAAATGGCTTCTTCCAAAGAACGTGAGAACTTCGTCTACGTCGCTAAGCTCGCTGAGCAAGCCGAACGCTACGATGAAATGGTTGAA
GCGATGAAAAATGTCGCAAACATGGATGTTGAATTGACTGTGGAGGAAAGGAATCTTCTTTCTGTTGGTTATAAGAATGTGGTAGGTTCT
AGGAGAGCATCTTGGAGGATCTTGTCCTCTATTGAGCAGAAGGAAGAATCTAGAGGAAACGAGCAAAATGTCAAGCGAATCAAGGAGTAC
CTGCAAAAGGTGGAGTCGGAGCTCACCAACATTTGCAATGATATTATGGTGGTCATTGATCAGCATCTAATTCCGTCATGCTCTGCAGGC
GAATCAACTGTGTTTTACCACAAGATGAAGGGAGACTATTATCGTTATCTTGCAGAATTTAAAGCTGGCAATGACAAGAAGGAGGTTGCT
GAGCTTTCATTGAAAGCATATCAGGCAGCTACAACTGCTGCGGAGGCGGAATTAGCACCCACTCATCCCATTCGTCTGGGACTGGCTTTA
AATTTCTCTGTTTTCTACTATGAGATCATGAATTCACCTGAAAGGGCATGCCATCTTGCAAAACAGGCCTTCGATGAAGCAATATCTGAG
CTGGATAGCCTGAATGAGGATTCCTACAAAGACAGCACCTTGATTATGCAACTTCTAAGGGACAACCTCACCTTGTGGACTTCTGATCTT
CCAGAGGATGCTGAAGATGCCCAAAAGGGAGATGCCACAAACAAAGCTGGTGGAGGTGAAGATGCAGAGTGAATGGGCCTAATAGTTAGA
ACTACTATGTGTATTTGGAGGTGTGACGACAAGGATACGCCAAGGGGGATGTTAGTTTGTTAAGTCTTAGTAGATACTTCTATTATGGGT
CTGTCGTGTCAGATTCTTCACTTGTTAATTGGTTGTCTGCAACTCAGTGTGTAATTTGTATCCCTGTGCTATTTCCGTTCTCCGTATAGT
GAGTTGTTTCAGTCTTTAGATAATTGCTGGTCTATAGGTGGTTTTATTTTTCAGATGACTGCCGCAGCCAAATGGAGGATATCAGCTATT
TGCTTGTCCTCTCACCCTTATTATCTCAATATCACTAAATTTCCATTATTTTCTCTTTTTTCATTTAGTTTGGAGCTGAGCATATATGCT
ACTCTATGTTGGTGCAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
tft9	tft9

Genomic locations (0)

None

Library representation (29)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	12
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	5
Solanum lycopersicum	LA	Leaf Mature leaves	6589	5
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	7
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	6
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	11
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	6
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	6
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSB	seed	1880	1
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (99)

Alignment image suppressed for unigene with 99 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313499	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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