Sol Genomics Network

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Unigene SGN-U581588

Unigene Basic Information

Unigene ID:	SGN-U581588
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1374 bp

>SGN-U581588 Tomato 200607 #2 (53 members)
CGGCCGATTACGGCAGTCTTCTCCGGCCAAAAGTAGAAAGTTGAAAACACACAGCGTTTTTCCATCTCCGTCTCTTTTTCTGGCGAAACT
GAGCTTAAGCTCGAATGGCTTTCTTTAACAAAGCTGGGAGCATTCTTCGGCAGGCTGTTAGCAAGCAGCACATCAATCACGAAATATCTG
CATCCAAGCCTTCAATTTTTCAACTTATTAGATGCATGTCTTCAAAACTTTTTGTTGGAGGAATCTCATGGAACACGAATGACAACTCTC
TCCAAGAAGCTTTCAGCAAGTATGGAGAAGTCGTTGAAGCAAGAATCATTTACGATCGTGAGTCTGGGAGATCTAGGGGATTTGGCTTCG
TTACTTTCAATACTTCTGAGGATGCCAGTGCTGCCATCCAGGCTTTGGACGGACAGGAGCTTGATGGTCGTAGGATTAGAGTAAATGTAG
CGAATGACAGGACAAGAGGATACGGTGGCGGTTACGGTGGCGGTAACTTTGGAGGCGGTGGTGGTTATGGTGGCGGCGGCAATTATGGGT
CTGGTGGTTATGGTGGTGGTGGTGGCAATTATGGGTCTGGTGGTGGCAATTATGGTGCCTCTGGTTATGGTAGCAGTGGCAATTATGGCA
GCGCAGGTGGTGTTGATGCTAACATCGCCAGCAGTTATGGAAGCGGAGAAAGCAATTTTGGCTTTGGCACAAGTGGTGATAACTATGCCA
GTGGAAGCACTGATGCTGCTGCTAGCAACAGCTTCAGCTTCGGCAACGACACTACCAGCAACCAAGCAGAAGCTTCTGATGTTAATAGCC
CAGTTGATGCAGGTGAAAATTACAGAGATGACAATGACTCCAACGATTATGCAGATAGAAGAGCCTAAAGGTTGAATTCCATACCCTTTC
TTCCCAATGCTATTGATAAAGGACCGAAATCGATGGAAGATGACATCTCTTCTTTCCATTGTTCTCTTTCATAGTCTTATCTTTCTCTCA
CTCCAGCTATATTTCCGACTTCTGTTTTTCGTCGTGGACTCGAGATTTTGCTTTTGTTTTACCTTGATTTGGATGCTTTATCCCGACTCT
GTGTAGCAAGAGCCAAACATTGTGTTAGCCAAGTAAAACCTTTTGGTGTTGAACCTAATTTTGTAAACAAGTCGTTATATGTTTGGATTG
AAGTGTCGAAACTGATACTATTGAGTCAGTCAGTGTGTCTCGTAAAAATGTTTTAGCACTTCCTATTTTGGTTAAATAATTGAAAAACTC
CGAAAAGAAATTTTATGTATAAAGTGTAAACGGTCAATTATTTAGACAAGTTGCAATTGGTATTATACATTAATGTAGTCAATTGGTCAT
TTAACCAAGCTGAAAAAAAAGAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (25)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	7
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	Sl_RootInf02	root and collar Three weeks old	333	1
Solanum lycopersicum	Sl_RootN	Roots 5 weeks	165	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	3
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2

mRNA member sequences (53)

Alignment image suppressed for unigene with 53 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315472	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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