Sol Genomics Network

Unigene SGN-U581465

Unigene Basic Information

Unigene ID:	SGN-U581465
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1150 bp

>SGN-U581465 Tomato 200607 #2 (445 members)
CAAAATCAAATGTGTGTATGTTGTTTGTAGCGATTAGCGACCAATCAACCAAATACCCAATTACGGCCGGGGATCCACTACTTCCTCATA
AACCTCATAATTACTATTCTAATTTTCATAAATCATTAAGAATGGAAATGGTTAACAAGATTGCATGCTTTGTGCTTTTATGCATGGTAG
TGGTTGCACCCCATGCAGAGGCTTTAACTTGTGGTCAAGTTACATCTACCTTGGCTCCTTGTCTCCCTTATCTAATGAACCGCGGTCCTC
TCAGAAACTGTTGTGATGGTGTTAAGGGTCTTTTGGGTCAAGCCAAGACTACAGTAGACCGACAGGCCGCATGCACTTGCCTAAAATCAG
CTGCTTCTTCTTTTACAGGACTCAATTTGGGCAAAGCTGCTGCTCTCCCTAACACTTGTAGTGTCAACATCCCTTACAAGATCAGCCCCT
CTACTGACTGCTCTAAAGTTCAGTAAAGCTGATCATCAGAATTTGGTTTCATGAGGAGAATTAAGAATAAGATAGATAGCATTGATCTTG
CTTATGGATCCTTTCTTTCTATGTTGTATCAGTTGTCACTTTCTCTTTTTTCTGTGTTTCGTTTAAAATCGTATGTACTCGAGTCTTGTT
TCGAAATTTGACGATTGATTATATTATATCAGTTGTTACTTTCTGTTTTCCTGTGTTTCTTTTAAAATCGTGTGTAGTCGAGTCTTGTAT
CGAAATTTCACGATTGGCTATGTTGTATTAATCTAATCTTTGATAATACACATCTATCTTATTTGGTAAAAAAAAAAAAAAAAAAAATGT
CGCGAGATCAACCATTACTTACATTACCACCTAATTTTCCATGTCTTGAGGAACTGGTCTCCAATGACGAATCTCTAGATAAGGTTTAAT
TATCTGAACGTTACGTCAAGGTACTAACCTCAACTGATTATTCCAAGTATTATCATTCATTAGTTTACTGAAAACAGTTGTTGCAATGCA
AGTTCTGCATTAACATTATATTTTTTTGTTAGTTGCTAATTTAGGACAATGGAGAAGTTGGAAGTAGGTATTGTGTTTTTGTAGGTATCA
TTAATTTCTACATTGGATTGACAACTTAACTTATTTTGGTGCAAATGATAACTGTTGTATTGCAATGGTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
ltpg1	non-specific lipid transfer protein

Genomic locations (0)

None

Library representation (33)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	4
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	11
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	3
Solanum lycopersicum	LB	Leaf Mature leaves	3316	3
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	LE08	Fruit 8 days post anthesis	339	1
Solanum lycopersicum	LeCAD	Seedling Two-week-old seedings	428	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	5
Solanum lycopersicum	LeMiToLf01	leaf	30679	7
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	3
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	210
Solanum lycopersicum	Sl_LeafWT01	leaf 1.5-month old plants	106	4
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	18
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	4
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	4
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	8
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	32
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	12
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	5
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	18
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	15
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	37
Solanum lycopersicum	cTSD	seed	1504	1
Solanum lycopersicum	vSlycmRNA		8362	3
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	11
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (445)

Alignment image suppressed for unigene with 445 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (17)

Annotations (manual: 1 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (4)

Unigene	Build
SGN-U314384	Tomato 200607 #1
SGN-U338617	Tomato 200607 #1
SGN-U338633	Tomato 200607 #1
SGN-U338635	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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