Sol Genomics Network

Unigene SGN-U581827

Unigene Basic Information

Unigene ID:	SGN-U581827
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2760 bp

>SGN-U581827 Tomato 200607 #2 (94 members)
GTTCTTTTTTGTTTTTCCCCTTTTCAAAATCAATCCAAACAGAGCCTTAACAGGGCCCAAGATAGCTTCTAGTCAAAATCTTACACACAA
TAAACTCACCACCACAGCGGCAGCAGTAGCAGACCGGAATCTCCTCCTTCCTCCTCCGTCTGCTCCGCCGTCTTTCTCCGATCAGCCGCC
GTCCTCCTCCTTCGCTCCAAAACCGTACTGTTAACACCGTGGTTTGGCTGTTTGTGTATCAAAATCTCAACTACCAAACAGTCAACAACT
ACTTATCTACTTATATACAACTACTTTTTCGTGTTTGTATCAGAGAGGTATAGGAAATGGAGTCGAGTTTGGAGTTGTTGAGATCGATTG
AATCGGCATTGGGAGTGTCGTTGGGGAGTGATACGGTGTTGGTGCTACTTACGACGTCGTTCGCGGTCATCGTTGGATTAGTAGTGTTCT
TCTTGAAGAGATCAAGTGATCGAAGTAAAGAAGTGAAGCCTGTGGTGTTCCCCAAGTCCTTACATGTGGAGCCGGAGGAGGAGACTGAGC
TAGAACCTGGAAAAGTTAAGGTCACCGTATTTTTCGGTACTCAAACTGGTACTGCTGAGGGTTTTGCCAAGGCTTTATCAGAGGAGATAA
AAGCAAGATATGAGAAGGCAGTTGTGAAAGTCGTGGACATGGATGATTATGCTGCCGATGATGATATTTACGAGGAGAAACTGAAGAAAG
AGACACTTGCATTTTTCATGGTGGCAACTTACGGGGATGGAGAGCCAACTGATAATGCTGCAAGGTTTTACAAGTGGTTCACTGAGGGAC
AAGAACGGGGTGCATGGTTGCAGAACCTTAGCTATGGCGTTTTTGCCCTGGGTAATCGCCAATATGAACACTTTAACAAGATTGGGAAGG
TGATAGATGAACAATTGAGTGAACAAGGTGCAAAACGTCTTGTGCCTGTTGGCCTTGGTGATGATGATCAGTGCATTGAAGATGATTTTT
CTGCCTGGCGAGAACAGCTGTGGCCAGAATTGGATCAAATTCTTAGAGACGAGGATGATGCAAATTCTGCTGCCACTCCATATACAGCTG
CAATTCCTGAATATCGTTTGGTTATCCATGATACCACTATGAGTCTTGAGGATAAGCATGCAGGCATGGCTAATGGGAATACCACATATG
ATATCCACCACCCATGCAAAGTCAATGTGGCTGTTCAGAGAGAGCTTCACACACCCGAGTCTGATCGCTCATGTATACACTTGGAGTTTG
ATATATCTGGCACTGGGATTTCCTATGAAACAGGAGATCATGTGGGTGTTTATGCTGAAAATTCTGAAGATACTGTTGAGGAAGCTGCGA
GATTGCTGGGGCAGTCATTAGACTTGATATTCTCTATTCATACCGACAAGGAGGATGGTACAGCTGGAGGAGGCTCGTTACCCCCACCTT
TTCCTGGTCCCTGCACTCTACGTGCTGCACTTGCTTGTTATGCAGATCTTCTGAATCCACCGCGGAAGGCTACTTTGGTTGCATTGGCTG
CCCATGCAGCTGAACCTAGTGAAGCAGAAAAGCTCAAGTTCTTGGCATCTCCTCAGGGCAAGGATGAGTATTCTCAATGGATTGTAGTAA
GTCAAAGAAGTCTTATTGAAGTAATGGCTGAGTTTCCATCGGCAAAGCCTCCCCTTGGTGTATTTTTTGCAGCAGTTGCCCCTCGTTTAC
AGCCTCGCTACTATTCAATCTCATCATCTCCTCGATTTGCACCCGCTAGAGTCCATGTAACCTGTGCACTAGTCTATGGTCCAACTCCCA
CTGGCCGAATTCATAAAGGAGTGTGTTCAACTTGGATGAAGAGTGCAGTACCTTCGGAGAAAAGTCACAATTGCAGCTCTGCTCCCATTT
TCATTAGGCCATCTAATTTCAAATTACCAGCCGACCCTTCAATTCCAATTGTCATGGTGGGGCCTGGGACTGGTTTGGCACCATTCAGGG
GATTCCTGCAGGAAAGAGCAGCATTGAAGGAAGATGGCGCTCAACTTGGTCCTGCTTTACTGTTTTTCGGTTGTAGGAATCGTAGAATGG
ACTTTATTTATGAGGAAGAGCTTCAGAGTTTTGTGGATCAAGGTGTAATATCAGAGCTGATTATTGCATTTTCAAGGGAAGGGTCACAGA
AAGAGTATGTTCAACACAAAATGATGGAAAAGGCTTCCCATGTTTGGAGTTTAATCTCTCAGGAGGGATATCTATATGTATGTGGGGATG
CTAAAGGGATGGCCAGAGACGTACATCGTACACTCCATACCATAGTCCAGGAGCAGGAGAATGCGGACTCATCCAAAGCAGAGGCTGTTG
TAAAGAAACTCCAAATGGATGGAAGATATCTCAGGGATGTGTGGTAATGATCATCGAGGCGTTGGTTCATTTGTTTTACTCATAGCAAGC
TTGCAAGGTCTTCTCATTTGCTTTGAGTTCCATAGCTAGAAAAGATCACCATCAATATAAGTTTTGTCCAGTAGGTTGTTGTTATTGCTC
TTCCATTGGAGCAGATATATGAAATTTTTTATTATAAGAAAAGATTTAAGTATTGATACAAAAACTTCTATATGTAGTTGGTAACAAACA
CAAATCAATCCCGAATCATGTTGTAAACTGTACCAAAAGGCTTTTGTAAGAATAGCTGTACAAATGAAGGGAGGGTAGAATAAGTGTGTT
GCTACACATTTATGTTGCTCTACTTTTTATATATTGCAATATTTCTTGTGCTCTTCTTCC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc04g076380	Solyc04g076380

Genomic locations (0)

None

Library representation (25)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	10
Solanum lycopersicum	LeMiToLf01	leaf	30679	16
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	14
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	4
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	5
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1

mRNA member sequences (94)

Alignment image suppressed for unigene with 94 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (15)

Annotations (manual: 3 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U313812	Tomato 200607 #1
SGN-U313813	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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