Sol Genomics Network

Unigene SGN-U270282

Unigene Basic Information

Unigene ID:	SGN-U270282
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270282
mRNA sequence:	Length: 984 bp

>SGN-U270282 Solanum tuberosum #4 (22 members)
CTCCGCCATTGCAGCTATTAGTTTTCTCTGTTTTCCTCCGCCACCATTAACAGTAACACCGCCGACTGAATCGCCTCGCTCCTCCATTAA
CTCGTTCTCTGTAACTCAACAATGAGCTGTTCATCTTCTTTGATTCTTCCTTCCATTTCTTCGAATGGATTTCGAAGATTTAGTCCATTG
AAATTGGATAAGTCTAGGGTTTTCATGAGTAGCATTTCCGTTGGATCACGAATTGCCGCCGTCGATGATGCTCTGTTCACTGATTACAAG
CCTACCAATGCTTTTCTCTTCCCTGGACAGGGGGCACAAGCTGTTGGAATGGGTGCAGAGGCTCAGAAGGTGCCTGCTGCAGCTGAATTA
TACAAGAGAGCAAATGAAATCATGGGGTTTGACCTTTTGGATATTTGTATTAATGGTCCAAAAGAGAAGTTAGACTCCACTGTTCTAAGC
CAGCCAGCTATCTATGTCACTAGCTTAGCTGCAGTGGAGATACTCCGTGCTCGTGAGGGGGGTCAACAAATAATTGATTCGGTTGATGTC
ACATGTGGTCTGAGCTTGGGCGAATACACTGCTCTGGCATTTACAGGAGCTTTCAGTTTTGAGGATGGGCTTAAGCTGGTTAAGCTTAGA
GGAGAAGCTATGCAGGATGCTGCTGATGCTGCAAAAAGTGCAATGGTTAGTATAATTGGACTGGATTCTGACAAGGTTCAGAAACTGTGT
GATGCAGCTAATGAGGAAGTTGATGAAGCCAACAAAGTTCAGATTGCAAATTTCTTATGCCCCGGAAATTATGCAGTCTCTGGAGGTGTT
AAAGGAATTGAAGCAGTAGAAGCAAAAGCAAAATCATTCAAAGCACGAATGACGGTACGTCTAGCTGTTGCTGGAGCTTTTCACACAAGT
TTTATGAATCCAGCTGTCTCAAGATTAGAAGCTGCTTTGGGTGCAACGGAGATCAGAACTCCCAGAATACCAGTAATATCAAAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	5
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	6
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	3
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (22)

Alignment image suppressed for unigene with 22 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2340	Ac_trans FabD	8
2	24660	Ac_trans FabD	8
5	58697	Ac_trans FabD	8
1.1	102930	Malonyl CoA-acyl carrier protein transacylase - Molecular Function: [acyl-carrier protein] S-malonyltransferase activity (GO:0004314) - Biological Process: fatty acid biosynthesis (GO:0006633) Acyl transferase region - Biological Process: metabolism (GO:0008152) - Molecular Function: transferase activity (GO:0016740)	9
2	120396	Acyl transferase region - Biological Process: metabolism (GO:0008152) - Molecular Function: transferase activity (GO:0016740) Malonyl CoA-acyl carrier protein transacylase - Molecular Function: [acyl-carrier protein] S-malonyltransferase activity (GO:0004314) - Biological Process: fatty acid biosynthesis (GO:0006633)	9
5	130684	Acyl transferase region - Biological Process: metabolism (GO:0008152) - Molecular Function: transferase activity (GO:0016740) Malonyl CoA-acyl carrier protein transacylase - Molecular Function: [acyl-carrier protein] S-malonyltransferase activity (GO:0004314) - Biological Process: fatty acid biosynthesis (GO:0006633)	9

Preceding Unigenes (1)

Unigene	Build
SGN-U244684	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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