Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U579041 and SGN-U593659 in the current build, Tomato 200607 #2

Unigene SGN-U212640

Unigene Basic Information

Unigene ID:	SGN-U212640
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	212640
mRNA sequence:	Length: 1560 bp

>SGN-U212640 Lycopersicon Combined #3 (209 members)
GCACGAGGGTCCCTTTGTGTTCCATTTCGCCTTACAGTTTTCTTCAGCTCGTTAGATCTACAAAAAAATGTCGGACGTAGAGACGTTTGC
TTTCCAGGCTGAGATCAATCAGCTTCTCAGTCTTATCATCAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTCATCAGCAA
TTCTTCCGATGCTCTAGACAAGATCCGCTTTGAGAGTTTAACCGACAAGAGCAAGCTAGATGGTCAACCAGAGCTCTTCATCCATATTAT
TCCAGACAAGGCCAATAATACTCTCACTATCATTGATAGTGGTATTGGTATGACAAAGGCTGATCTGGTGAATAACCTGGGTACAATTGC
AAGGTCAGGAACCAAGGAGTTCATGGAAGCTCTTGCAGCTGGTGCTGATGTTAGCATGATTGGTCAATTCGGTGTAGGTTTCTACTCTGC
TTACTTGGTAGCTGAGAAGGTTGTTGTGACCACAAAGCACAATGATGATGAGCAATATGTCTGGGAGTCTCAAGCCGGTGGCTCTTTCAC
TGTTACCAGGGATACATCTGGTGAGAACCTTGGTAGGGGTACCAAGATGGTCCTTTATCTCAAGGAGGATCAGCTTGAATACCTTGAAGA
ACGTAGGCTCAAGGACCTGATTAAGAAGCACTCTGAGTTCATTAGCTATCCTATTTCTCTGTGGGTTGAGAAGACCATAGAGAAGGAAAT
TTCTGATGATGAGGAGGAAGAGGAGAAGAAAGATGAGGAGGGAAAGGTAGAGGAGGTCGATGAGGAAAAGGAGAAGGAAGAGAAGAAAAA
GAAGAAGGTCAAAGAAGTTTCCAATGAGTGGTCACTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAGCCAGAAGAGATCACAAAGGA
AGAGTATGCTGCTTTCTACAAGAGCTTGACTAATGATTGGGAAGAGCATCTTGCTGTGAAGCACTTCTCTGTTGAGGGTCAGTTGGAGTT
CAAGGCTGTCCTTTTTGTTCCAAAAAGGGCTCCTTTTGACCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGTTGTATGTTCGCCG
TGTGTTTATCATGGATAACTGTGATGAGTTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTGGATTCTGAGGACCTTCCTCTCAA
CATCTCCAGAGAGACATTGCAGCAGAACAAGATCCTAAAGGTTATTCGCAAGAATTTGGTGAAGAAGTGTGTTGAGCTTTTCTTTGAAAT
TGCTGAGAACAAGGAGGACTACAATAAGTTCTATGAGGCGTTCTCTAAAAACCTCAAGCTTGGAATCCATGAGGATTCTCAGAACAGGGC
AAAGTTTGCTGAACTGCTGAGGTACCACTCCACTAAGAGTGGTGATGAGATGACCAGCTTGAAGGACTATGTGACCAGAATGAAGGAGGG
CCAGAATGATATTTACTACATTACTGGTGAGAGCAAGAAAGCTGTTGAGAACTCTCCCTTCCTGGAGAAACTGAAGAATAAGGGATATGA
GGTGCTCTACATGGTTGATGCCATTGATGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (23)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	4
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	27
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	20
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	10
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	10
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	3
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	13
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	5
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	23
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	8
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	17
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	20
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	8
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	18
Solanum lycopersicum	cTSC	seed	2256	6

mRNA member sequences (209)

Alignment image suppressed for unigene with 209 aligned sequences.
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Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	181	Hsp90 ATPbind_ATPase	79
2	22083	Hsp90 ATPbind_ATPase	74
5	56336	Hsp90 ATPbind_ATPase	73

Preceding Unigenes (1)

Unigene	Build
SGN-U143132	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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