Sol Genomics Network

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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U566267 and SGN-U596473 in the current build, Tomato 200607 #2

Unigene SGN-U213967

Unigene Basic Information

Unigene ID:	SGN-U213967
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213967
mRNA sequence:	Length: 1345 bp

>SGN-U213967 Lycopersicon Combined #3 (48 members)
ATTTGCTTACTTTGTTTTTGAGTTTTTCTCCTTCTGTTGTTCTGGTTCTTGTTTTTCTCCTCTTTTTTAGCCCTTTTGATTTCTGGGTTC
CTTGTCTTTGTGGCTAAAATCCATCAAAGATCCAATCTTTTTTCACAAATTCTGTTCCTTTTAACCTCTGATTTCTGGGTTTTTGCTGAA
ACCCATCATAGATCCAACCTTTTTCTGTTCTGAGTTGAAACCCATCAAAGATCTAACCTTTTCTCTTCTGGGTTTTTCAATCTTTGTGGC
TAAAAGATCCAATTTTTTTCTCCATTTTTCCTGCTCTGTTTTCTGGGTTTTTACTCTTTTCTTGCTGAAACCCATTAAAGATCTGTGAAA
AAAAGAAGCAAAAATTAATGCTAATTAGAAATATTTATTGATGTACCAGATTCATGTCTCCAGTTCTTAGTGAAATCCTTCGTTCTGGTT
ATATAATCAGTTCATCACTTAGACGCAGAACTCATCTTGTTCAATCTTTCTCTGTTTCTTTCCTCTACTGGTTTTACACTTTCTCAGAAT
ATTAAAAAAATAATAATCTTCATCTATAATTTTGCTTAGCATACCTTAAGAAACTTTAAAATTAGTACTTCTCCCATCATCTGTACATAA
AAAAAATGGCTACTTCTAGTGGTAATTCATCTCAGATTCCAAACAATTCAGCTTCTGATGAAGTTTTCATGGTGGTTGATGAAAGGAAAA
GAAAGAGAATGCAATCGAATCGCGAATCAGCAAGAAGATCAAGAATGAGAAAACAGAAACATTTGGATGATTTGATGTGTCAAGTTACAC
AATTGAAGAAAGAAAACAGCAACATTCTGAACAGCATCACCATGACAACACAACAATATGGTAATGTTGAAGCAGAGAACTCTGTTTTAA
GAGCACAAATGATGGAATTAACTCAAAGGTTGCAATCTCTTAATGAAATCCTCACTTACATCAATAATTCAAATAATAATAATAATTATT
ATCAAGAGGATTTTCAGATGAATCCATGGAATTTGATGTATGTTAATCAGCCAATTATGGCTTCTTCTGATATGTTATATCAGTATTAGT
GTTTAATTAAGGCTTGGTATTGGGTTATTTTATTATTAATAGTAAGATTTGAGTATTAGAATGAGTTTAATGTGAAATTTGAGCAGTCAA
AAGAGGATTAGTTGACTGTTATTTGGGCAATGCAAAAAAAAAAATGGGATCATGTGATGATGATATATTGGAATGAATGGTTGTGATTGC
ATTATGTTTTTTCTATTTATTATATATTTTTAATAAATGCAAGTTGTTTTTATTGTACTAAAAAAAAAAAAAAAAAAAAACTCGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	4
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	8
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	9
Solanum lycopersicum	cTSB	seed	1880	1

mRNA member sequences (48)

Alignment image suppressed for unigene with 48 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 1 | blast: 2 | go: 6 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	32	TF_bZIP	291
2	22937	TF_bZIP	17
5	56940	TF_bZIP	19

Preceding Unigenes (1)

Unigene	Build
SGN-U144420	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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