Sol Genomics Network

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Unigene SGN-U269356

Unigene Basic Information

Unigene ID:	SGN-U269356
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269356
mRNA sequence:	Length: 616 bp

>SGN-U269356 Solanum tuberosum #4 (23 members)
GAGAGAGAGAGCCGCAGAGTTTGCTCAGGAAGAAGCTCTCATCCAGAGCGAAAATGACTTTCAAGCGAAGGAACGGAGGTCGTAACAAAC
ATGGACGTGGCCATGTCAAGTTCATCCGCTGCTCTAACTGCGGCAAATGCTGCCCTAAGGACAAAGCCATCAAGAGGTTCCTTGTGAGGA
ACATTGTTGAACAAGCTGCTGTACGTGATGTTCAGGAAGCTTGTGCTTTTGAATTGTACACTCTTCCTAAGCTCTATTTGAAGATGCAGT
ACTGTGTTTCATGTGCAATTCACTCCAAGGTGGTTAGAGTCCGTTCTCGTACTGACAGGAGGGTTCGTGAGCCTCCACAGCGTTTCAGGC
GCCCAAGGGATGATCTCCCAAAGACAGGACAAGCTCCACGCCCCGCTGGAGGACCCCCTGCTGCTCCACGCACTTAAGTTATTAGGATTC
AGGTTTTGGTTAATCTGATAGTTATGGCGTGTTTTACATGTGGTGGTTTTGACATTGTACTGTTTTCATCTAGATATTTGAACCTATTAC
CATGTTATGGAATTGAATTTTGAATGGAAAACAGATATTCAAGTTTTCTGAATAGAAGGCTCTCAATTTGTGCTTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	IVROOT	Root	5850	1
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	1
Solanum tuberosum	STOL	Stolon	6462	2
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	TUBS	Tubers	5976	3
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	4
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (23)

Alignment image suppressed for unigene with 23 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1122	Ribosomal_S26E	17
2	22976	Ribosomal_S26E	17
5	57086	Ribosomal_S26E	17
1.1	102306	Fibronectin type III-like fold Ribosomal protein S26E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	17
2	119342	Fibronectin type III-like fold Ribosomal protein S26E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	17
5	129681	Fibronectin type III-like fold Ribosomal protein S26E - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	17

Preceding Unigenes (1)

Unigene	Build
SGN-U244236	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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