Sol Genomics Network

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Unigene SGN-U270147

Unigene Basic Information

Unigene ID:	SGN-U270147
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270147
mRNA sequence:	Length: 1390 bp

>SGN-U270147 Solanum tuberosum #4 (24 members)
AATTGAGTTAGTTAGGGTTCCTCCTTCCTTCTTCCCTCACTTCCATTTCGCTTCAATCACTGTTGGACACAATGTCGCAAGAATCACTAG
TCCTCCGCGGCACAATGAAGGCCCATACAGATTGGGTGACAGCCATTGCCACTCCGATCGACAACTCCGACATGATTGTCACATCGTCTC
GTGACAAATCCATCATTGTTTGGTCACTTACAAAAGAGGGCTCACAATACGGTGTCCCCCGTCGCCGTCTCACCGGACACGGCCATTTCG
TCCAAGATGTTGTCTTATCATCAGACGGTATGTTTGCACTTTCCGGATCTTGGGACGGTGAACTCCGTTTATGGGATCTTCAAGCTGGAA
CCACTGCCCGGCGTTTCGTCGGACACACGAAGGATGTTTTATCCGTTGCATTTTCAGTTGATAACCGTCAGATTGTTTCTGCATCTCGTG
ACAAATCGATTAAGCTATGGAACACTTTGGGTGAGTGTAAGTACACGATTCAGGATCAAGATTCACATTCTGATTGGGTGTCTTGTGTTC
GTTTTAGCCCAAATAATCTTCAACCAACTATTGTTTCTGGATCATGGGATCGGACTGTGAAAATCTGGAACCTTTCTAACTGTAAGCTTC
GCGCTACTCTTGCTGGGCACACTGGTTATGTGAATACTGCTGCAGTATCTCCAGATGGTTCTTTGTGTGCTAGTGGAGGAAAGGATGGAG
TGATTTTGTTGTGGGATTTGGCTGAAGGGAAGAAATTGTACTCCCTTGATTCTGGTTCTATTATTAATGCTCTTTGTTTTAGTCCCAATA
GGTACTGGTTATGTGCTGCAACTGAGTCGAGTATTAAAATTTGGGATTTGGAGAGTAAGAGTATTGTCGTTGATCTTCGTGTTGATCTTA
AGCAAGAGACTGAAATGTTTGGCAATGCAACTTCTACTTCTGGCAATGGCAAAACCAAGGTTATATACTGCACCAGTTTGAGTTGGAGTG
CTGATGGGAGCACACTTTTCAGCGGATACACAGATGGTCTGATTAGAGTGTGGGGTATTGGCCGTTACTAGGATAAACATATAGCACCAT
TTGGCCTGACTTCCATTTAGATGAAATCTAAATGATAGGAAGAAGTACACCGGTTTCTCTTTGTTTTCATAGTTTTGGATTTTATTTAAG
CATGTTGTTATGTTGGATGTAGATGATCCATCCAACAAGCGGTTTTTGCCTAGTCCTCGGGTAACTTTGTGTTTCCTTTTATGTTTTTCT
ACCTTACAGATATTTAGTTTTTTTATGAGAAGTCTTCAACTATCTCTTTACTCCTTTTTATCCTCATTTTTTTTTGTGTTTGGGCAAAAT
TTTTTACTGCAATTATTTATCGGGTCATTTTCCCAAGGTA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
DQ222493	G protein beta subunit

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	3
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	3
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	5
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (24)

Alignment image suppressed for unigene with 24 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	6	WD40	833
2	22056	WD40	91
5	57083	WD40	17
1.1	101368	WD-40 repeat	806
2	118510	WD-40 repeat	72
5	129797	WD-40 repeat	15

Preceding Unigenes (1)

Unigene	Build
SGN-U244792	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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