Sol Genomics Network

Unigene SGN-U270439

Unigene Basic Information

Unigene ID:	SGN-U270439
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270439
mRNA sequence:	Length: 1430 bp

>SGN-U270439 Solanum tuberosum #4 (20 members)
AGAGAATCGAAGGAAGACGTGAGAACTTCGCCGGAGGCATCGCAAGCCACACAATAAAATAGACGAAGGAGAAAGAAGAAGAAGAAGAAT
CTCCGTCTTTAATGGCTGCCGCCTCAGCTAGGGTTTTACTCGCATCTCGTCTAGCAGACCTCTCACTTAAGCCTCATCAACATCCTCCTC
ACCTACCCCCTCCTTTTACCCACCATCTCCTCATCCGTCCCTTGCTTCCTTCTCTTTCCGCTTCCACCAGGCGGCGTACGTCCGTTAACT
GCCTTATTTCCGGCGTAGACGGCGGCGGTGTTTCGGACGACTTTGTTTCCACCAGGAAGTCCGGTTTCGGCAGTGAATTCTCTGTTATTG
CCAATATGCTCAAGCGAATTGAACCGTTGGACACTTCTGTTATATCTAAAGGCGTTTCTGATTCTGCTAAGGACTCAATGAAGCAGACGA
TTTCTACTATGTTAGGCTTGCTCCCTTCAGATCAATTCTCAGTGACTGTTCGGTTTTCCAAACACGCTCTCGATCGCCTCATTGTTTCTT
CTATTATTACCGGGTATACGTTGTGGAATGCGGAGTACAGGATATCCTTGATGAGGAATTTTGATATCCCATCCGATAATTTGAAAGGCT
TCAACTCATCGGAGGAAGATGTGAACTCAGGCTCAAAGAGCAAGGGGATAGAGGGGGGAGAAAGCGGAGTTGGTGTAAATATGTCTTCTG
CGGTTTCAGAGAGAATGGATATTCAAGCTCTTGGGAATTTATCTCCGGAAGCTCTGAAATATGTTCAACAATTAGAAGAAGAACTCTCAT
CAGTTAAGCAGGAACTGCATTCCCAGCAACAGGAAAATTTGCAAATGGAGTATATCAACGAAAGTAACAATGATTTGCTGGATTACCTTC
GGTCATTGGAATCTGACATGGTGACTGAACTATCCAGACCATCATCCTTTGAGGTGGAGGAAATTATTAAGGAACTTACTCAAAACATAT
TGCAAAGATTTTTCAAAGAGGACGACGTTAACAAAGAAGAAGATTCTAATTTCACTGGTGCCAAAGACTACCAAAGTAGTGATACCGAAT
TATGCGATGCAATAGGCACTTCTCGGGATTACTTGGCAAAACTACTTTTCTGGTGTATGTTATTGGGCCATCATTTGAGAGGATTGGAGA
ACAGATTGCATCTAAGTTGTGTCGTCGGCTTGTTATGAGTTTGGGAAGTACAAAGAGGGATGTACATTCTGCTTCTCTTTTACTCCCCTT
CTCTTTTTCTCTTTCTAGCTCAATTATTTCCTGTTATTTATATAAGAATAATCCACATATCCTGTAAAATTTTGTTCTTGCAAGTCACGA
GTAATTGCATGGGAGGGTGTACTGTTGAAAATGATAAATCCATTTCTCAGATTCTCTTTTCCTTGATAGCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	1
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	TBSK	Tuber Skin	4812	3
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	5
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	2

mRNA member sequences (20)

Alignment image suppressed for unigene with 20 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1001	Apolipoprotein	19
2	23260	Apolipoprotein	14
5	60237		5
1.1	102436		14
2	122671		5
5	132862		5

Preceding Unigenes (2)

Unigene	Build
SGN-U245115	Solanum tuberosum #3
SGN-U261848	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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