Sol Genomics Network

Unigene SGN-U270513

Unigene Basic Information

Unigene ID:	SGN-U270513
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	270513
mRNA sequence:	Length: 973 bp

>SGN-U270513 Solanum tuberosum #4 (18 members)
AAGAAACCTCTCACTCTCCAACAATGGCAACCCTTTCCCTGTGTTCTACATCTTCCCCCTCAACAGCACTTTCCAAGAACCAAACTTTCC
TAAACACCCTTTCTGTTCCCAAAGCAAATTCCAATGTTGCTTTTCTATCTCACTCACTTTCTTCTCTCAATCTCCGTTTCTCCAAACCCA
ATTCTTTTTCCTCTTTTGTACCCAAATTCTCTGAATCTGAAGCTCCAGTAGCTGAAGTTGAAGCTGACCCAGAAGAGCCTGATGCAACCC
CAGTTGTGGAAGCCACTAGCTTGGAACCAAAACGGGAAGAAATCTTTGCTGTTGTTATGGTTGGATCTCGGCAATATATTGTCTTTCCTG
GGCGGTATATCTACACCCAGAGGCTTAAAGGTGCAAATGTCAATGACAAAATTATCCTAAACAAGGTGTTACTAGTGGGAACAAAAACAA
GTACTTGGGTTGGAAAACCAGTGGTGCCAAATGCAACAGTCCATGCTGTTGTTGAAGAGCAGTTGAAAGATAAGAAGGTTATCGTCTTCA
AGTATAAGAAGAAAAAGAACTACAGAAGGAACATTGGTCACAGACAGCCAATTACTCGGATAAGAATAATGGGCATTACTGGTTATCAAG
ATTCACCAGCAGTCACCCTTGCAGACCTAGAAGCAGCCAAGTGACTTTTAGGCTCAAGATTACATCCAAATTACTGTTTTCTCAGGATTA
TGTAGTTTTGTATAGACCGAGGAAGCAATGACAGAAATGAGTTTTGGAAGGCGCATTTAACTTCATCTTTTGTTGTAATTTCCATCCATT
TTGTTTCTTTGCATGTATTATTTGGTTGAGCAATGTACTTGAGTTTTGAATATTTCAGAAACCTCTTTTTGATTGAACGCCAATTATTCT
TTGCACTTACTAGGCCAAACATGTCTGTCATTCATAATCTTCTTAAATTGCAAGTGAATATTAGAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPC	leaf 6 week old	5062	3
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TBSK	Tuber Skin	4812	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1

mRNA member sequences (18)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1389	Ribosomal_L21p	13
2	24333	Ribosomal_L21p	8
5	58388	Ribosomal_L21p	8
1.1	102663	Ribosomal protein L21 - Molecular Function: RNA binding (GO:0003723) - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	11
2	120964	Ribosomal protein L21 - Molecular Function: RNA binding (GO:0003723) - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	7
5	131217	Ribosomal protein L21 - Molecular Function: RNA binding (GO:0003723) - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	7

Preceding Unigenes (1)

Unigene	Build
SGN-U245001	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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