Sol Genomics Network

Unigene SGN-U272562

Unigene Basic Information

Unigene ID:	SGN-U272562
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	272562
mRNA sequence:	Length: 1444 bp

>SGN-U272562 Solanum tuberosum #4 (9 members)
AATTCGACTACTCCAATGGCTTTGAGCTCAACCTTGTTTAACTTCTACATCTTTATTTTGGTTGTATGTTTTATTCACCCAATTTTGTGT
ATTAGCAGCCATGGAAGACCTCAAGCTGGCCTTTTCGTGTTCGGTGATTCATTGTTCGATCCCGGAAATAATAACTACATCAACACCACT
ACTGAGTACCAAGCAAATTGGCGGCCATATGGAGAATCATTCTTCAAGTACCCTACCGGCAGGTTCTCCGATGGACGTCTCATCCCTGAT
TTTATCGCTGAATATGCTGATTTGCCGTTGATTCCTTCGTATTTTGAAATTGGCAAGCAACATTTTGTTCATGGGGTAAACTTTGCATCA
GGCGGTGCTGGTTGTTTGGTCGAAACTCATCGTGGTTTTGTTATAGATCTTCAAACACAGTTGAGATATTTCAAAAAAGTCGTAAAACTG
TTGAAGAAGAAGGTGGGGAAAACAGAGTCCAAACAGATCCTTTCGAATGCTGTATATATTTTTAGCGCTGGTGGTAACGATTACTTGGCT
CCTTTGTCAACAAATTCTTCATATCCTGAGAGAGAATATCTAAAGATGATTATGGGCAATTTGACATCTGTTCTGAAGGGAATTTACAAG
GAAGGAGGGAGAAAATTTGGCATGCTTAATATGGTTCCAATAGGTCGTCTCCCTAATACTATAGCTCTCAATGGCAATTCCATAGGGAAG
ATCACAAACTTGGTAAAAATGCATAATTCGGCTCTTCCAAATACACTCAAACAACTGGAGAAGCAATTGCCTGGATTTAAGTACTCATTA
TTCAACTTGTTCAAAGTATTTTCAGATAGCGTTGATAATCCAACAAAATATGGTATGTTCTTTTCTCATCAAACTCAACGTCTAGTCTCT
TTATGTTTGAGCATTCTTGATTTATGTTAACATAGCTAATATGGCAATGAGTACTATAGGTTGTTTTTTTATAGTAATATGGAATAGTCT
CTTTATAGTCTTAATTTACTTACAATTTTGCTTTGTTTAGGTTTTAAGACATCAAAGACGGCTTGTTGTGGGGCTGGTCCATTACGAGGG
ATTTATAGTTGTGGAGGCAAGAGACAAGTAAAAAAGTACAAGTTATGTAAAAACGTGAAAGATTACTTGTTTTTCGACTCTTTTCATCCC
TCTGAGCTGGCCTCCAAACAATATGCCGAAGTAATGTGGAATGGAACTCCAGACGTCGTTGCACCTTACAACCTTAAATCTTTTTTTGAA
CTTTCAACATAACATGATGGTGGCATTGCTGAAACTGTTCTGTTATTCCATATTAAAGGAAAGTAGAAGAAAAGTATGTGAAACTTGATA
CTAAAAAGAATGTCCTTCTGATTAGGAAGGTCATATTGAGATTAATAAAACTTCCCCTCTTTGTCTTTGTTCTTCTATAAAAAAAAAAAA
AAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	33	Lipase_GDSL	287
2	21983	Lipase_GDSL	280
5	56275	Lipase_GDSL	174
1.1	101406	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	261
2	118422	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	248
5	128942	Lipolytic enzyme G-D-S-L - Biological Process: lipid metabolism (GO:0006629) - Molecular Function: hydrolase activity acting on ester bonds (GO:0016788)	163

Preceding Unigenes (1)

Unigene	Build
SGN-U248628	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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