Sol Genomics Network

Unigene SGN-U567167

Unigene Basic Information

Unigene ID:	SGN-U567167
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2657 bp

>SGN-U567167 Tomato 200607 #2 (86 members)
GCTTCAACAAGATGCTGTACAAGTATCATTTTGTCAGCATTCAATGTTGCCTAATCTATTTAGGAAGAGTATTCAATCTTCTCTTTTAAT
TTTTTTCTGAAACCCCATTTTATAACAAGTCTTTTGAGACCTAATTCTTTGTACTTGAATTTGGGGTGTGAAGATAGAGACTTGGGTCAT
TGATAAAAATGGCGGCAGGAACTGTTCCAGCTTCATTTACAGGCTTGAAGAGCAATGAAAATGGTTTGGGGTTCGCAAAAAGTATGAACT
TTATAAGAGTTTCCGACTTACAGAGGGTTAAGTTCCGGCGAACAAAATTTTCTGTGATAAGAAATGCAAATCCTGGTCAAGAAACCATTG
AACTTCAGCCTGCATCCGAAGGGAGTCCACTACTAGTTCCTAGGCAAAAATATTGTGAATCCATATACAAAACTGTCAGAAGACAGACCT
GCACTGTGATGGTTGGGAACGTGGCTCTTGGTAGCGAACATCCAATTAGAATTCAAACAATGACCACAACTGATACCAAAGATGTCGCTG
CAACAGTAGAACAGGTGATGAAAATTGCTGATGCGGGAGCTGACATAGTTCGGATTACAGTCCAAGGGAGGAAAGAAGCTGATGCATGTT
TTGAAATTAAAAATACTCTGGTGCAAAAGAATTACAACATCCCTCTGGTGGCTGACATTCATTTTGCTCCTTCTGTTGCACTTCGAGTGG
CTGAGTGCTTTGACAAAATACGTGTCAATCCTGGAAACTTTGCTGACAGGCGAGCCCAGTTTGAGCAATTAGAGTACACAGAAGATGACT
ATCAGAAAGAACTCGAGCATATTGAGGAGGTCTTTACACCATTGGTGGAAAAATGTAAGAAGTATGGACGTGCAATGCGCATTGGGACAA
ACCATGGGAGCCTTTCAGATCGCATTATGAGCTATTATGGGGACTCACCTAGGGGAATGGTAGAATCAGCATTTGAGTTTGCCAGAATTT
GTAGAAAGTTGGACTTCCACAATTTTGTCTTCTCAATGAAAGCTAGCAATCCAGTAGTTATGGTTCAGGCGTATCGCCTTCTTGTAGCTG
AGATGTATGTTCAAGGATGGGATTATCCTTTACACTTGGGAGTTACTGAAGCTGGTGAAGGTGAGGATGGAAGGATGAAGTCTGCAATCG
GAATTGGCACACTTCTTCAGGATGGTTTGGGTGATACGATACGGGTTTCCCTAACTGAAGCTCCAGAAGAGGAGATAGATCCCTGTCGAC
GATTGGCAGACCTTGGTAAAAGAGCAGCTGCGCTTCAGCAAGGAGTGGCCCCCTTTGAAGAAAAGCACAGACGTTATTTTGACTTTCAAC
GTAGGTCAGGGGAATTGCCAGCTCAAAAGGAGGGTGATGAAGTAGACTACAGAGGCGTGTTGCATCGAGATGGTTCTGTTCTTATGTCTG
TCTCTTTGAATCAATTAAAGACCCCTGAACTTTTGTACAGATCATTAGCGGCAAAGCTTATTGTTGGCATGCCATTTAAGGATTTGGCAA
CTGTGGACTCAATCCTGTTGAGGGAACTTCCACCACTAGATGATATAGATTCTCGTCTAGCTCTCAAGAGATTGGTCGACATAAGCATGG
GAGTCATTGCTCCTCTCTCAGAGCAATTGACAAAGCCATTACCCAATGCCATGGTCTTGGTTACTCTGAAGGAGTTGTCTGGTGGTGCTC
ACAAGCTTCTTCCCGAAGGTACGAGATTGGTTGTGTCTCTGCGTGGCGATGAATCACATGATGAGTTGGAAATCCTGAAGAGCTCTGATG
TTACAATGATTCTTCATAATCTGCCATATACAGAGGAAAAAATTGGCAGGGTTCAAGCAGCCAGGAGGCTTTTTGAGTATCTTTCCGAGA
ATTCCTTGAACTTTCCAGTGATTCATCACATACAATTTCCCAGCAACACCCACAGAGATGACTTAGTGATTGGTGCCGGGACAAATGCGG
GAGCCCTCTTGGTAGATGGGCTTGGTGATGGACTTCTCTTGGAAGCTCCAGACAAGGATTTTGATTTTCTCAGAAATACATCTTTCAATT
TGCTTCAAGGTTGCAGAATGCGGAACACAAAAACGGAATATGTATCATGCCCATCCTGTGGCAGAACTTTATTCGATCTTCAAGAGATAA
GCGCTCAAATTAGAGAGAAGACGTCACACTTGCCTGGTGTTTCAATTGCCATCATGGGTTGCATTGTGAATGGACCTGGGGAGATGGCTG
ATGCTGACTTTGGATATGTTGGTGGTGCTCCTGGAAAGATTGACCTTTACGTCGGCAAGACAGTGGTGAAACGCGCTATTGAAATGGAGC
ATGCAACGGATGCACTGATCCAGCTAATCAAAGATCATGACCGCTGGGTTGATCCTCCTACCGAGGAGTAAGACTAGATCGCCGAGTTCA
AGAGATGGAAATGATGCAGATTATATCAACTGGATAATAATACAACTAGCATAGCTACTCCAGAGAGCTGCCATTTCCAAGCAGCAGAGA
TTATATCTTTTTATATGTTGTAGAATTTTATGTATCATGCAAAATGAAGAACATGGTTTATTACATGTATCAATGAATACAAGCTCCTAG
TCCCCTTTTTGGGTAATCTAATGAAATAGGGTATGGCAGTTCAATCT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
gcpe	GcpE

Genomic locations (0)

None

Library representation (24)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	17
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	10
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	6
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	6
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	vSlycmRNA		8362	4
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	5

mRNA member sequences (86)

Alignment image suppressed for unigene with 86 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U314139	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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