Sol Genomics Network

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Unigene SGN-U576388

Unigene Basic Information

Unigene ID:	SGN-U576388
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1368 bp

>SGN-U576388 Tomato 200607 #2 (88 members)
AAGGAGTGTTGCCTACATATATTTTGGGGTTGGAGAGGGAGAAAATCTCAAAGTAACTAGGACCATCCGCCGGCTTCAAAACCTCTGCTC
TCTCCTTATCTTCTTTTCTTCCTTCACTCTCTCTACCCTAGAGATATGTCTTCTCTTACCAAACCCTTAATCAAGAATTTATCAATGGCG
ACCAATTCTTGCCTTATCTCTCTTCCACCCTTCTTCACTACAACCAAATCCATGTCTTTTATTTCAACCCCATTAAAACCCATCTCCCTT
TCTTCCTCTTTATCTCTTAAAAAGACCACTACCCAATTCCCATCTATTGTTTCTGTAGTGGCTGCTCTGCAAGATGATGACAGCAGTGTT
GGCCTTGAAGATAAAGAACAAGGTGGGGAAGCGCTTAGCTTTGATTTTGCAAGTGTTGGTGATGCAGGGGAGAGTGATGAGGCTGAGGCT
GAGGCAGAGGAGTATCAAGAACCTCCGGAAGATGCGAAATTGTTCGTTGGGAATTTACCCTATGATATAGACAGTGAGGGGTTGGCTCAG
TTGTTCCAACAGGCTGGTGTTGTTGAGATTGCTGAGGTCATTTACAATAGGGAGACTGATAGAAGTCGTGGATTCGGGTTTGTGACAATG
AGTACCGTGGAAGAAGCTGAGAAAGCTGTAGTACTGTACAACCGTTATGATCTCAATGGAAGGCTCTTGACAGTCAACAAAGCTGCTCGA
AGAGGATCACAGCCAGAACGTCCACCTCGAACATTTCAGCCTACTTACAGAATCTATGTTGGCAACATCCCATGGGACATTGATGATGCA
CGCCTTGAGCAAGTCTTCAGTGAACATGGTAAAGTAGTAAGTGCTCGGGTGGTTTATGACAGAGAGTCTGGAAGGTCACGAGGCTTTGGT
TTTGTGACAATGTCAAGTGAACCTGAGATGAGTGAAGCAATAGCCAACCTTGATGGACAGACTTTGGATGGGAGGACGATCAGGGTAAAT
GCTGCTGAAGAAAGACCTAGGCGCAACACATTTTGATTTTGATCATATGTTTTATTTGTTCGATTGCATAGCAGTGGCAGTTGTGCAGTT
ATGAGCAGTTAGATTTTCATCAGACGTCTTTAATTTTGCTCTCTACTTGTAAGTTTTTATTTGTTGATTACTTATATAGGGCACAGCGAC
TTTTTTTGTGTTCTTTCTTCTTTCTTTCTACCGCTCTTACCCTTTGGGGGGACTCTGAAGTAGAGGATTGAATGCTGTAAGATTTTCAAT
TCTATTTGTGGTAGTTCTCATTTGCCGTTAGCTTTACACCTTGATGTTGATAAAACTGATTCAGACATTTGGAAGCAAAATGGATTGGAA
GCTTTACTATGATTAAGA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc03g111840	Solyc03g111840

Genomic locations (0)

None

Library representation (29)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	5
Solanum lycopersicum	LB	Leaf Mature leaves	3316	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	5
Solanum lycopersicum	LeMiToLf01	leaf	30679	8
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	8
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	6
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	12
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	5
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	4
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	4
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (88)

Alignment image suppressed for unigene with 88 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (6)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313676	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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