Sol Genomics Network

Unigene SGN-U268270

Unigene Basic Information

Unigene ID:	SGN-U268270
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268270
mRNA sequence:	Length: 672 bp

>SGN-U268270 Solanum tuberosum #4 (42 members)
TTTCGCTCTGAGAATCAGCAAAAATGCAGAAGCAAGAAGCAGCCGCAGCTACGGTGGAATCCGTCCAATGCTTCGGGAGGAAGAAGACGG
CAGTGGCGGTGACTCACTGCAAGCGTGGACGTGGTTTGATCAAGATTAACGGTGTCCCAATCGAGCTTGTCCAGCCGGAGATCCTCCGGT
ACAAGGCCTTTGAACCAATCCTTCTCTTAGGCCGTCACCGTTTCGCTGGAGTCGATATGCGTATCCGTGTGAAGGGAGGTGGTCACACTT
CTCAGATCTACGCTATCCGTCAGTCGATTGCAAAGGCACTTGTTGCGTTTTACCAGAAGTTTGTGGATGAGCAGCAGAAGAAGGAGATTA
AGGATATTCTCATTCGCTATGATAGGACTCTCCTTGTTGCTGATCCTAGGCGTTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGTT
CTAGGTTCCAGAAATCTTACCGTTGATTTCAATCTTCAATACTCTGGATTACCATTTACGGTAATTGAATTAATGTTTTTGTTAGTGTCC
TTTCGGTGTTTTGCTTAAAGACCATATTTGGTTTTGGGAGGCTTCTAGTTAATTTTTGCCATGTCTGTTTTTTCTTGCTGAAACTTTTAC
AGTGCTATGATATTGTTAGTTTCAAATTCCCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDC	Sprouting Tubers	5177	1
Solanum tuberosum	CSCH	Tubers	5038	1
Solanum tuberosum	CSWB	Tubers	6124	7
Solanum tuberosum	IVROOT	Root	5850	4
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	PPC	leaf 6 week old	5062	2
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	2
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	3
Solanum tuberosum	STM	mixed tissues	14805	1
Solanum tuberosum	STOL	Stolon	6462	3
Solanum tuberosum	SWST	Stolon	5942	4
Solanum tuberosum	TBSK	Tuber Skin	4812	5
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	3
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	1

mRNA member sequences (42)

Alignment image suppressed for unigene with 42 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	1196	Ribosomal_S9	16
2	23075	Ribosomal_S9	16
5	57154	Ribosomal_S9	16
1.1	102205	Ribosomal protein S9 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	19
2	119189	Ribosomal protein S9 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	19
5	129540	Ribosomal protein S9 - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	19

Preceding Unigenes (1)

Unigene	Build
SGN-U243310	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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