Sol Genomics Network

Unigene SGN-U268568

Unigene Basic Information

Unigene ID:	SGN-U268568
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268568
mRNA sequence:	Length: 886 bp

>SGN-U268568 Solanum tuberosum #4 (33 members)
CGAGGCACAGACGGACACAGAGCTGCTTGAGAGGGAGAGAGAGAGAGAGGACGGCACTGAAAATGGTGACCTTCAAATTTCATCAGTACC
AGGTGGTGGGTAGAGCTCTTCCATCAGAGACCGATGAACACCCAAAGATCTATCGCATGAAACTTTGGGCTACCAATGAGGTCCGTGCGA
AATCCAAGTTCTGGTACTTTTTGAGGAAGCTGAAGAAGGTTAAGAAGAGCAACGGGCAGATGCTTGCTATTAATGAGATCTTTGAGAAGT
ACCCTACTAAGATCAAGAACTACGGCATTTGGTTGCGTTATCAGAGTCGCACTGGGTACCACAACATGTACAAGGAGTACCGTGATACCA
CATTGAATGGAGCTGTAGAACAGATGTACACAGAGATGGCTTCACGTCACAGGGTCCGCCATCACTGCATCCAGATCATTAAGACAGCCA
CTATTCCAGCTAAACTGTGCAAGAGGGAGAGCACCAAGCAGTTCCATGACTCCAAAATCAAGTTCCCCTTGGTGTTCAAGAAAGTCAGAC
CACCTACTAGGAAACTCAAGACTACATACAAGGCTACAAAACCCAACTTGTTCATGTAACATGTTAGGTCATAAGTTTATTGAGAAGCAA
CTTAGAATTCATGCAAATTTTGTTGCACTAGTTCGCCAGTTTGGCATTAATGGAAAACCTTTATGTCCCTTTTTCCTTTTAACTCTAGGT
ATCAGACAGTTAAAGTTTCTCCTTTCTGAGTTCTAAATTTGTTTGCTTCAACAGTTCCAGTTCAAGTTTTATGTGTTCTCTCATGGTTGG
TTGGTCGGTCAATTTGTTGGGATTTTGTTATTGTTTTGTGATATTACTACTATAATACAATTGGTGTCAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	2
Solanum tuberosum	ACDC	Sprouting Tubers	5177	3
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	MXFL	Floral buds	6603	3
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPC	leaf 6 week old	5062	2
Solanum tuberosum	STM	mixed tissues	14805	4
Solanum tuberosum	SWST	Stolon	5942	1
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	6
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	5

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	681	Ribosomal_L18ae	27
2	22515	Ribosomal_L18ae	26
5	56675	Ribosomal_L18ae	26
1.1	101928	Ribosomal L18ae protein - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	28
2	118829	Ribosomal L18ae protein - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	28
5	129283	Ribosomal L18ae protein - Molecular Function: structural constituent of ribosome (GO:0003735) - Cellular Component: intracellular (GO:0005622) - Cellular Component: ribosome (GO:0005840) - Biological Process: protein biosynthesis (GO:0006412)	27

Preceding Unigenes (1)

Unigene	Build
SGN-U243461	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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