Sol Genomics Network

Unigene SGN-U269863

Unigene Basic Information

Unigene ID:	SGN-U269863
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269863
mRNA sequence:	Length: 1542 bp

>SGN-U269863 Solanum tuberosum #4 (28 members)
GGGCTGCAGGCCCATTTAGCTAATCTCTCAGTCATGGCTGAACAAGGAAGCGCCGCCGCAGCTCCGCCGTCTGAGTTGAAAATCCGGCTG
GCTGGTAGCACCGAGCACAGCTGGTGCAAGGCGGTTCCCGGTGGCACAGGTATAACAGTCTTAGCTCTACTCTTATCAAAACCACCAGAC
ATTTCACTTCTCCAAAATGCCCTTCACAAACTTCAAAATTCCAATCCTATCCTCAAATCTCAACTCCATTACGAATCAAGCACAAATTCC
TACTCTTACATCATTCCCTCCACTTCTCATCTTCAAATCCAGCCGTTCGATCTCTCATCAACGGTTCAGATTCTCCGACGCCTCAAAACC
TCCGATCTCACCTCCGTCTCCGATTTTCATCTCATCCTCGAACACGAAATCAACCAGAACTCATGGATAAACACCGGCACTTCATCAGAT
TCCGACACGGATATTTTCTTCGCGAGCATTTATCAATTAGAAAACGAGAAATCGGTCGTCGCGTTAAGGATTCATACATCGGCGTGTGAT
CGGGCAGCAGCGTTGGCGCTACTGAAAAAGTTGCTGGAGCTGGTGAGTGGGGAAGACGGAGAAGGGACAGAATTGGAATTATTGAAAAAG
ATGGAGGTTGGTTTGGGGATTGAAGAGTATATTCCAGCTGGTAAAGCGAGTAAGCCATTTTGGGCGCGTGGGATTGATATGGTGGGGTAT
GGATTGAATTCATTGAGATTTTCTAATTTGAAGTTTATGGATTCGGAATCAACGAGAGGATCACAAGTTGTGAAATTGCAGTTGAATAAA
GAAGAAACTGATCGCATTCTTGATGGCTGCAAAACGAGAGATATAAAACTGTGTGGACTGTTGGCTGCTGCTGGATTAATTGCAGCTCAT
TCCTCAAAAGGCCTAAATGAGAATCAATGGGAGAAGTATGCAATTGTAACCCTAATTAACTGCCGTTCAATTCTTGATCCAGTGCTTAGC
CCTGATTTTCCAGGCTTTTATCATTCTGCCATCCTCAACACGCATGACGTAAAGGGAGGAGATGATTTATGGGAGCTAGCAAAGAGAAGT
TACACATCTTTTATCAACGCCAAGAACAATAACAAGCATTTCACAGACATGGGAGACCTGAATTTCCTCATGTGCAGGGCCATTGATAAT
CCTGGCTTAACTCCATCCTCTTCACTAAGGACTTCTCTCATCTCTGTATTTGAAGACCCTGTGATTGATACCTCCAGCACAGTGCATCAA
GAAATCGGATTAGAAGACTTCATCGGGTGTGCATCCGTGCATGGGGTAGGCCCTTCTATTGCCATATTCGACACAATTAGGGACGGACAG
TTGGATTGTGCATGTGTTTATCCCTTCCCCTTGCATACTAGGGAACAAATGCAGGAGCTCATTGGTGAAATGAAAAAAATCCTTGTTGAC
TGCTAGTATATTACTAAAACAAACATTATGTTTCCCCACTGATCATGTTCAATGAAAATGCAATAAATTTCCTACAAACAGTTTGTTTTT
TTACAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	4
Solanum tuberosum	MXFL	Floral buds	6603	1
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	5
Solanum tuberosum	STOL	Stolon	6462	3
Solanum tuberosum	SWST	Stolon	5942	6
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	3

mRNA member sequences (28)

Alignment image suppressed for unigene with 28 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	2504	UPF0024	7
2	24939	UPF0024	7
5	58964	UPF0024	7
1.1	103589		6
2	121771		6
5	131987		6

Preceding Unigenes (2)

Unigene	Build
SGN-U244967	Solanum tuberosum #3
SGN-U250530	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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