Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U579437, SGN-U590633, and SGN-U593660 in the current build, Tomato 200607 #2

Unigene SGN-U313448

Unigene Basic Information

Unigene ID:	SGN-U313448
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	313448
mRNA sequence:	Length: 1203 bp

>SGN-U313448 Tomato 200607 #1 (87 members)
GCGATTGGCGGCCAATCGGCCGAATTCCCATGGGGATCAGAACTAGATCTCGTGTTTTATCTTCTGTTTCACACACTTCTAGAGAGAAAT
AGGGTGATTGGCGTAGTTTTTATTTTCTTTTCTGTGGTTATTTTTGAATTCTTAGGAAATGTTGGGTGTATTTAGCAGTTCCATTGTTTC
TCCGCCCGACGAGCTCGTCGCCGCCGGTAGCCGGACTCCTTCACCTAAGATCACGTCGGATGCTCTGGTGAACCGGTTTGTTCAAAGCAA
TTCGTCGGCGATTTCTATGCAGATCGGCGATTTTGTCCAACTCGCTTACTCTCACTCCAAAGAGTCTGCTGTACTCCCCAGGTCATTTGC
TGTTAAGGATGACATATTTTGCTTGTTTGAGGGATCACTTGACAACTTAGGGAGTCTGAGGCAACAATATGGCCTTGCCAAGTCTGCAAA
TGAGGTGATGCTGGTGATTGAAGCATACAAGGCACTTCGTGACAGAGCACCTTACCCTCCAAATCATGTTGTTGGTCACCTTGAAGGCAG
TTTCGCTTTCATTGTTTTTGACAAGTCTACTTCCACCTTGTTTGTGGCTACCGATCAAGTTGGTAAGGTACCCCTCTACTGGGGAATCAC
TGCTGATGGGTATGTGGCCTTTGCCAATGATGCTGATTTGCTTAAAGGTGCTTGTGGCAAGTCACTTGCTTCTTTTCCTCAAGGGTGTTT
CTACTCTACAACAGTTGGAGGACTGAGAAGCTATGAGAACCCCAAAAACAAGATCACCGCCGTTCCTGCTACTGAGGAAGAAATATGGGG
CGCTAAGTTCATGGTGGAAGGTTCAGCTGTTGTTGCAGCCACAGAATAGAAGTCCTCTGAGGGAAAAACAAGGCCGTGAGTATTAGTGGG
GAAGCCATGTAAATAAAGTGAACGAGTACTGTTTTCTCTTCCTAGTAATTCTAAGTTCTACTTTTCTGCTGCATTAGGATAGAGTTAGGT
CTAAAAGTATGATGTTTGGTTTCTTCTAGGTATTTTAACTACTAAAAATCAATGTACACCTTTCTTTCAGCTCAATAATGTTTGTAATAG
TCTATGTAAATGAACAATGAAGAGCCTGTTCATGCAAAAAAAAAAAAAAAAAATTTCTCTTCTTGCTTCCTCGGCTCCTTACTCGAGCTT
GATTGCAATTTGCAACAAAATTGAAAATCTGCA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (28)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	16
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	2
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	9
Solanum lycopersicum	LA	Leaf Mature leaves	6589	7
Solanum lycopersicum	LC	Leaf Mature leaves	5712	2
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	9
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	5
Solanum lycopersicum	cTOS	suspension cultures	8026	4
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	cTSD	seed	1504	1

mRNA member sequences (87)

Alignment image suppressed for unigene with 87 aligned sequences.
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Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101594	Glutamine amidotransferase class-II - Biological Process: metabolism (GO:0008152)	65
2	118647		40
5	129929		14

Preceding Unigenes (1)

Unigene	Build
SGN-U213892	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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