Sol Genomics Network

Unigene SGN-U565588

Unigene Basic Information

Unigene ID:	SGN-U565588
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2504 bp

>SGN-U565588 Tomato 200607 #2 (113 members)
AGAGGGCATTTTGTATAGGCTACAGTCAACATCGGTCACTTGTATTCAGCCCACCGTTTAACAAGCATCTTTTTCTTATTATACATGTCG
CCTCTCTCTGTTTAGCACTTTTGCTACTTATCCCTATAAATATAAAAGCAAATAGTTGTGTTTTGTGTGTAGTTTTAGACCTTGTAGTTG
AATCTGGCAAAAGCACAACAAACAGTAGAAGTAAAATCTTGAAGGGGTGTTGTAGTTTGATCTGTGACTTTTGTAGTGACTGATAAATAG
AAGAAATGGCCAACATAGACATAGCTGGAATCATGAAGGATCTCCCAAATGATGGCCGTATTCCAAAGACCAAGATTGTTTGCACGTTAG
GGCCATCTTCTAGAACAGTGCCAATGCTGGAGAAGCTTCTCCGTGCTGGCATGAATGTTGCCAGGTTTAACTTTTCTCATGGGACCCATG
AGTACCATCAGGAGACATTGAACAATCTTAAGATTGCGATGCAGAATACTCAGATCCTGTGTGCTGTCATGCTTGACACCAAGGGTCCTG
AGATTCGTACTGGTTTCTTAACAGATGGAAAACCGATTCAGCTTAAGGAAGGTCAAGAAATCACTGTATCCACAGACTATACCATAAAAG
GAAATGAAGAAATGATCTCAATGAGCTATAAGAAGTTGGTAGTGGACTTGAAGCCCGGCAATACCATCTTGTGTGCAGATGGTACCATAA
CCCTTACTGTTTTGTCATGTGATCCACCGTCTGGAACGGTGAGATGTCGCTGCGAGAATACTGCCACCTTAGGAGAGAGGAAGAATGTAA
ACCTTCCAGGTGTGGTTGTGGACCTTCCAACACTTACAGAGAAGGATAAAGAAGATATACTAGAGTGGGGTGTTCCTAATAACATTGATA
TGATAGCGCTTTCGTTTGTGCGTAAGGGTTCAGATCTTGTCAATGTTCGCAAGGTTCTTGGTCCACATGCCAAGCGCATTCAACTAATGT
CAAAGGTTGAAAACCAAGAAGGGGTCATCAACTTTGATGAAATCCTTCGTGAGACAGATTCTTTTATGGTTGCTCGAGGTGATCTCGGAA
TGGAAATTCCAGTTGAGAAGATTTTCTTGGCTCAGAAAATGATGATATACAAGTGTAATCTTGCTGGCAAAGCTGTGGTAACTGCCACTC
AGATGCTTGAATCAATGATCAAGTCTCCACGACCCACCCGTGCTGAGGCTACTGATGTGGCTAATGCTGTCTTGGATGGCACTGATTGTG
TTATGTTAAGTGGGGAGAGTGCAGCTGGTGCTTATCCTGAGCTGGCGGTAAAAATCATGTCACGAATCTGCATTGAAGCAGAGTCTTCAC
TTGACAACGAGGCTATCTTCAAGGAAATGATCAGGTGTACCCCATTGCCAATGAGCCCATTGGAGAGTCTTGCATCATCAGCTGTCCGCA
CGGCTAACAAAGCTAGAGCAAAGCTCATTGTTGTCCTGACACGTGGCGGGAGTACAGCAAAGCTGGTTGCCAAGTATAGGCCTGCAGTTC
CTATTCTGTCAGTAGTCGTGCCTGTTTTGACTACAGACTCTTTCGATTGGTCCATCAGTGACGAGACCCCAGCTAGACACAGTTTGGTAT
ATAGGGGCTTGATTCCACTTCTTGGTGAAGGTTCCGCAAAGGCCACTGATTCTGAATCAACTGAGGTAATCCTTGAAGCTTCCCTGAAGT
CTGCTGTAACGAAAGGGCTATGCAAACCTGGTGATGCTGTCGTTGCACTTCATCGTATTGGTTCTGCATCCGTTATCAAGATTTGCATCG
TGAAGTAATCGTCATGTCACGTAACATACAATTCTTGAACTCCCCCACACCTGAGCTCAGACTGATTTTCATTTATGCTTTTCTGGTCTT
GATTATGCATTATCAATATGCTGATTATGTCACTTTGTGTTAGGATATCTAGTATTATCACCAAGGATTACTATATTTCATGTCTGCTTC
AAACATTGGGTTTAAAATAAATATTCCTCTGGTGCAGCAATATCCTGATTTACATTGTTCCAATGGTTCTTTCATTTTAGATATCAGTGA
TAATTGCTATACTATTATCTGTTCCTATATTTATAAAACTCTATTTACCTTATAACAAGTTAAATACGAGGATTATGATAGGAGGTCAGT
ATGTAATTGTGTGTTCGTATAAATTTTTTGATCAGGTCTTGTTTTTCAGTGTTAGTGTCTTTTTGGTTATCGTATTACTTGTTGTTGCTA
TTATTGTTTTTCCACTTGTTTACTGTATTTATTTCACGTGCTTGACTTTTTAATAGGCTCTATTTGAATCGCGAGTCTATTAAATCTTTT
AATCAGTTTAGTTCTCTTGTTTTTCAGTTTTAGTGTCTTTTTGGTTTTCGTATTACTTGTTATTTGCTATTATTGTTTCTCCACTTGTTT
ACTATATTTATTTCACGTGCTTGCTTTTTTTAATAGGTTCTATTTGAATCGAGAGTCAATTAAATTAATTAATC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (27)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	7
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	14
Solanum lycopersicum	LeMiToLf01	leaf	30679	27
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	2
Solanum lycopersicum	Sl_RootInf01	root and collar Three weeks old	385	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	15
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	7
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	2
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	6

mRNA member sequences (113)

Alignment image suppressed for unigene with 113 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (16)

Annotations (manual: 1 | blast: 3 | go: 3 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (2)

Unigene	Build
SGN-U314040	Tomato 200607 #1
SGN-U334742	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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