Sol Genomics Network

Unigene SGN-U268123

Unigene Basic Information

Unigene ID:	SGN-U268123
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268123
mRNA sequence:	Length: 1615 bp

>SGN-U268123 Solanum tuberosum #4 (144 members)
TGATCTTTGATCTTGGTGGTGGTACCTTTGATGTATCTCTCCTCACCATTGAGGAAGGTATCTTTGAGGTGAAGGCTACTGCTGGAGACA
CTCATCTTGGAGGTGAGGACTTTGACAACAGGATGGTCACCCATTTTGTTCAAGAATTCAAGAGGAAGAACAAAAAGGATATCAGCGGTA
ACCCTAGGGCACTTAGAAGGTTGAGAACTGCTTGCGAGAGGGCGAAGAGGACCCTTTCATCCACTGCTCAGACCACAATTGAGATTGATT
CTCTCTATGAGGGTATTGATTTCTATTCCACCATCACCCGTGCTAGATTTGAGGAGCTTAACATGGATCTGTTCAGGAAGTGTATGGAAC
CAGTTGAAAAGTGTTTGAGAGATGCTAAGATGGACAAGAACTCTATCCATGATGTTGTACTTGTTGGTGGCTCCACCAGGATTCCCAAGG
TTCAGCAGCTATTGCAAGACTTTTTCAATGGGAAGGAGCTCTGCAAGAGCATCAACCCTGATGAAGCTGTTGCTTACGGTGCTGCTGTAC
AAGCTGCAATTTTGAGTGGTGAAGGTAACGAGAAGGTGCAAGACCTGTTGTTGTTGGATGTTACCCCTCTTTCCCTTGGACTGGAAACTG
CTGGAGGTGTCATGACTGTATTGATCCCTAGAAACACCACTATCCCAACCAAGAAAGAACAGGTCTTCTCAACCTACTCAGACAATCAGC
CAGGTGTGTTGATCCAGGTCTATGAAGGTGAGAGAACTAGGACCAGGGACAACAACTTGCTTGGCAAATTTGAGCTCTCTGGTATTCCTC
CTGCTCCCAGGGGAGTTCCTCAGATCACAGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTTTCTGCTGAGGACAAGACTACTG
GACAAAAGAACAAGATCACCATCACCAACGACAAGGGCAGGCTCTCCAAGGAGGAGATTGAGAAGATGGTTCAAGAAGCAGAGAAGTACA
AGTCTGAGGATGAAGACCACAAGAAGAAGGTAGAGGCAAAGAATGCTTTGGAGAACTATGCATACAACATGAGGAACACCATCAAGGATG
AGAAGATTGCATCCAAGCTGCCTGAGGCAGACAGGAAGAAGATTGAGGAAGCCATTGAGCAGGCCATCCAGTGGCTCGATGCCAACCAGC
TTGCCGAGTCTGATGAATTTGAGGACAAGATGAAGGAGTTGGAGAGCATCTGCAATCCAATTATTGCCAAGATGTACCAAGGTGCTGGTG
GTGACATGGGTGCTGACATGGGTGATGATGGTCCTGCTCCTAGTGGTGGCAGCGGTGCCGGTCCTAAGATCGAGGAGGTCGACTAAGCTG
TTTCTGCTCCTCATGTTTTTGGTTTCGTCAGTTAGTTTTTATCCTTGAGAACTCCATTTTATAATTTCTGCATCGTAGTTTTTAGTTAAT
GGTGATACTTTTGCGTATTTTGGCTTGAACTTGTTTATCAAGTATACTATCATTTTTCGGATTTATAATTTCAGATTTTGCTAAAAAAAA
AAAAAAAAAAAAATTAATCTATATCTATGCCTTAAAAAAAAAAAAAAAAAAAATCGAGACTAGTTCGGGGGGGCCCGGTACCCAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (19)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	10
Solanum tuberosum	ACDC	Sprouting Tubers	5177	17
Solanum tuberosum	CSCH	Tubers	5038	14
Solanum tuberosum	CSWB	Tubers	6124	12
Solanum tuberosum	IVROOT	Root	5850	8
Solanum tuberosum	MXFL	Floral buds	6603	3
Solanum tuberosum	MXLF	Leaves	6585	9
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	5
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	13
Solanum tuberosum	STM	mixed tissues	14805	3
Solanum tuberosum	STOL	Stolon	6462	9
Solanum tuberosum	SWST	Stolon	5942	11
Solanum tuberosum	TBSK	Tuber Skin	4812	7
Solanum tuberosum	TUBS	Tubers	5976	4
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	1
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	12

mRNA member sequences (144)

Alignment image suppressed for unigene with 144 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	75	Hsp70	160
2	22013	Hsp70	147
5	56292	Hsp70	122
1.1	101444	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	154
2	118449	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	129
5	128965	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	105

Preceding Unigenes (1)

Unigene	Build
SGN-U243314	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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