Sol Genomics Network

Unigene SGN-U268370

Unigene Basic Information

Unigene ID:	SGN-U268370
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	268370
mRNA sequence:	Length: 1447 bp

>SGN-U268370 Solanum tuberosum #4 (152 members)
CTAGTCTCGAATTTTTATTTTTATTTTTAAAAAGAGGGCCCTATTGTAGATCAAAGGTGATCTTTGTGTCTTTAAAAAGAAAAGAAGGGA
AGTGGAAAAAATTGACTCCATACTCATCACTCTGCATTTTCGAGTCTTCACAATCATATCCTCCTAACCACACACAGAAGAAAAAAAATG
GCAAGTCTTACAGTTCCGGCAGAAGTTCCTTCCGTCGCTGAAGACTGTGAACAACTCCGATCTGCCTTCAAAGGATGGGGAACGAACGAG
AAGTTGATTATATCAATTTTGGCTCATAGAAATGCTGCTCAACGCAAATTGATTCGACAGACTTATGCTGAGACTTTTGGGGAAGATCTA
CTTAAAGAGTTGGACAGAGAACTTACCCATGATTTTGAGAAATTGGTGCTAATATGGACACTGGATCCGTCAGAACGTGATGCCTATTTG
GCTAAGGAAGCTACTAAGAGATGGACAAAAAGCAACTTTGTTCTTGTGGAGATAGCTTGTACTAGATCTCCTAAAGAACTGGTTTTGGCA
AGGGAAGCTTATCATGCTCGTAACAAGAAATCTCTCGAAGAGGACGTTGCTTATCACACTACTGGGGATCACCGCAAGCTTTTGGTACCT
CTTGTGAGCTCCTACCGATATGGAGGAGACGAGGTGGACTTGCGCCTTGCTAAAGCAGAATCTAAAGTGCTGCATGAGAAGATCTCCGAT
AAGGCTTACAGTGACGATGAGGTCATTAGAATTTTAGCCACAAGGAGCAAAGCGCAACTCAATGCTACTTTGAATCATTACAAAGATGAA
TATGGTGAGGATATCCTAAAGCAATTGGAAGATGAGGATGAGTTTGTTGCACTATTGAGGGCCACCATAAAAGGTCTTGTCTACCCTGAG
CACTATTTCGTGGAGGTTCTTCGTGATGCAATTAACAGGAGAGGAACAGAGGAAGATCATCTGAGCCGAGTTATTGCTACAAGGGCTGAG
GTCGATCTGAAGACTATCGCTAACGAGTACCAGAAGAGGGATAGCATTCCTCTGGGTCGCGCCATTGCCAAAGATACAGGAGGAGATTAT
GAGAATATGCTGGTGGCTTTACTTGGACAAGAGGAGGAATGAGGAGGATTGGCTCACTTCTGTTTTATAATGACCAGAATAAATATGCCA
TCTCCCATATATTTCAGAGTTGGCATCTGTTTGATGATTGAGTGTGGTCTGTTTCACATGAGCTTTTAGTCCTTTTCTTCGTGTGAGAAA
CTTTGAATATGCATCTTTGTGCTGTCTAAAAATATTTTCTAATAATTTGCATCAATTACTTATCATCTTGTATCCATTACAATATCTTCA
ACTACGCCTCAGTTTCAAGCAAGTTGAGATCTATCAATGTCACTTCATTTAAACTAAAAAAAAAAAGAAAAAAACAAAAAAAACAAACAA
AAAAGAC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
an34	annexin p34

Genomic locations (0)

None

Library representation (22)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	9
Solanum tuberosum	ACDC	Sprouting Tubers	5177	7
Solanum tuberosum	CSCH	Tubers	5038	16
Solanum tuberosum	CSWB	Tubers	6124	4
Solanum tuberosum	IVROOT	Root	5850	6
Solanum tuberosum	MXFL	Floral buds	6603	4
Solanum tuberosum	MXLF	Leaves	6585	2
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	2
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	STOL	Stolon	6462	7
Solanum tuberosum	SWST	Stolon	5942	5
Solanum tuberosum	TBSK	Tuber Skin	4812	6
Solanum tuberosum	TUBS	Tubers	5976	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	7
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	15
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	3
Solanum tuberosum	cSTC	sprouting eyes from tubers 12-14 weeks post harvest	870	1
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	24
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	1
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	27
Solanum tuberosum	vSTmRNA		708	1

mRNA member sequences (152)

Alignment image suppressed for unigene with 152 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 2 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	387	Annexin	44
2	22222	Annexin	43
5	56686	Annexin	26
1.1	101768	Annexin - Molecular Function: calcium ion binding (GO:0005509) - Molecular Function: calcium-dependent phospholipid binding (GO:0005544)	39
2	118661	Annexin - Molecular Function: calcium ion binding (GO:0005509) - Molecular Function: calcium-dependent phospholipid binding (GO:0005544)	38
5	129261	Annexin - Molecular Function: calcium ion binding (GO:0005509) - Molecular Function: calcium-dependent phospholipid binding (GO:0005544)	28

Preceding Unigenes (1)

Unigene	Build
SGN-U243390	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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