Sol Genomics Network

Unigene SGN-U269677

Unigene Basic Information

Unigene ID:	SGN-U269677
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269677
mRNA sequence:	Length: 1583 bp

>SGN-U269677 Solanum tuberosum #4 (28 members)
TTTTTTTTCAATTCTATATTGAAAAACACATAATTTATTAACAACAAAAGGATGAACAAACTTTCATTACAAAAGGCTATTCAAAGCATA
CTTAGTAACAAACAAGTAAAACAATTCAACTCAAAAACTCCTAATCCACTTCCTCAATCTTTGGTCCAGCACCACTTCCACTTCCTGCAC
CACCACCAACAGAAGGACCATCATCTTCATCCGTAGTAGCTCCACCAGCACCACCTTGATACATCTTGGCAATAATCGGATTGCATACGC
TTTCCAGTTCCTTCATCTTGTCTTCAAATTCATCAGCCTCTGCAAGTTGGTTGCTGTCTAGCCACTTGATAGTTTCGTCAATCGCGTCCT
CAATCTTCTTCTTATCAGCACCTGGAAGTTGGGAACTAACCTTGTCATCTTTAATAGTGTTCCTCATGTTGTAAGCGTAATTCTCCAATC
CATTCTTAGCTTCCACCTTTTTCTTGAGCTCTTCATCTTCAGACTTGTACTTCTCAGCTTCTTGCACCATTCTCTCAATCTCTTCCTTGG
AGAGCCGACCCTTGTCGTTGGTGATAGTTATCTTGTTCTTCTGTCCTGTAGTTTTGTCCTCCGCGGAGACATTCAGGATTCCATTGGCAT
CAATGTCGAAGCAGACATTGATTTGAGGAACACCCCTTGGTGCAGGTGGGATGCCAGAGAGTTCAAACTTGCCTAACAGGTTGTTGTCCT
TGGTCCTCGCTCTTTCTCCTTCGTATACCTGGATCAGGACACCGAGCAACTGATCGTACTGAGCCATGTCTTACATTCCACCACACAAGA
GGCACACAAAGGGTTCGCCGTCGCGGGAACCAACTCCCGCACCGGAATCCCTCATACCTGCCTTCAGAAAAAACCTGAATTTCAAGAGAA
AGGAAAAGTTTCTGTTTGAGATCCGTTATGCTCATGGTGCAGTTAGGAAATGGTTCCCTGTTGGTTTGACTGATGATTCTCACTTTTCAT
CTCTTGTGAAGCTCCAACCTCTTTCTATCGACCGAAAATCTGACGAAAATCCTCTTCGTTTGGTCCTAATGCAAGGTTGCAGTGGAGGAA
CAAATGAGCTTATGGATGAGCCATGGCGTTTGGTGGCTAATAGTGTGATGGAGGACTTACTTTTGTCATTTCAACATGTGAAATGTGAAA
TGGAGGAATCTAATATGGAAGAATTGAAGCTGAGTCTAGTTGCTCGTTTTGGAAGAATTCTGTTTCATGGGATTTCTGCAAAAAGTCAAG
AATCCCTGAAAAGTAACCTATTAAGTGAAAATACGTTGAGGCAAATGAGAAAATCTTTCTATACCAATGTTCCTCTTTCATATATGGAAT
ATATACGAAACCTTGCAGTTGAAAAACTTGACTTAGAATGTGTAGAGGAGAAGGAATTATACTACGTCAAGCTTTCAGACAACATGCGTG
CTGATTCAACTGTCACCTGCAAATGTACGGTGGTCAAGGATCAGGAGAAAATTCAGCTCCATAAGTTTGTCATTCCTTATCAATCTTCTG
ATGCTACGCCTTTTCTTTTAGATTGAGCTGAAACAAATACGCAACATGGTTGC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	ACDA	Tubers	5977	2
Solanum tuberosum	CSCH	Tubers	5038	2
Solanum tuberosum	CSWB	Tubers	6124	1
Solanum tuberosum	MXFL	Floral buds	6603	2
Solanum tuberosum	MXLF	Leaves	6585	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	SLMW	Assorted Stolon/Tuber Developmental Series	1368	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	SWST	Stolon	5942	2
Solanum tuberosum	TUBS	Tubers	5976	1
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	1
Solanum tuberosum	cSTA	Axillary buds of stemp explants; swelling stolons; growing stolons; growing sink-tubers 1 to 3 days (plates 1-20), 4 to 6 days (plates 21-40), 7 to 10 days (plates 41-60)	10537	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	2
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1
Solanum tuberosum	cSTE	periderm and subperiderm 24 and 48 hour, and 5 and 7 day	5425	2
Solanum tuberosum	cSTS	sprouting eyes from tubers 12-14 weeks post harvest	9230	5

mRNA member sequences (28)

Alignment image suppressed for unigene with 28 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 1 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	75	Hsp70	160
2	22013	Hsp70	147
5	56292	Hsp70	122
1.1	101444	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	154
2	118449	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	129
5	128965	Heat shock protein Hsp70 - Molecular Function: ATP binding (GO:0005524) Heat shock protein 70	105

Preceding Unigenes (2)

Unigene	Build
SGN-U244705	Solanum tuberosum #3
SGN-U262495	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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